| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1747 |
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| Symbol | |
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| ID | 3906813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2079853 |
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| End bp | 2080584 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637879085 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_480852 |
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| Protein GI | 86740452 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.461787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.255777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGAGGG TAGAGGCGGT TCTGTTCGAC TGGGCGGGTA CGCTCACCCC ATGGGCGAAC
GTGGACGTCG CCGGATTCTG GGCCTTGGCT GCGGCCTACG TGGTGGGACG GAACCCCGAA
AAGACCGCGG CAGCATTGCT GGCGGCAGAG CGCGAGCTGT CGGTCCGTGC CCGTGAGCGA
CACAGCTCGG CCACACTGGC CGAGCTGTTC TCCCTCGCGG GAGTGCCGCA CACCGAGCAG
GCCGCCGCCG CGTATCTGGA CGCTTGGACA CCTCACACGC TACTCGACCC GCTGGCTCCC
AGGCTGCTGA CCGAGTTGCG CGAGCGCGGT CTGCGGGTGG GCCTGCTATC GAACACCACG
TGGCCGCGCG AGCGGCACGA GGCCATCTTC GCCCGCGACG GTGTGCTGGA CCTGTTCGAT
GGGGCCGTCT ACAGCAGCGA GATCCCCTGG GCCAAGCCGC ACCCGGAGGC CTTCCGTTGC
GCCCTGCGTG CGGTGGGGGA TGTGCCACCG GAAAATGCCG TATACGTCGG AGATCGGCTC
TACGAGGACG TGTACGGCGC GCGGGTGGCG GGTCTTCGCG CGATCCTCAT CCCTCACAGC
GAGGTGCCGG AGAAGGAGTT GGTGGCCATC GAGGACACCA CTCCGGATGC GGTGATCTAC
CGCTTGGACG ATCTGTTGGC AATCATCGAC GGCTGGAACG CTCCCGGGGT ACCGGTTGAA
GGTGTGAGTT GA
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| Protein sequence | MRRVEAVLFD WAGTLTPWAN VDVAGFWALA AAYVVGRNPE KTAAALLAAE RELSVRARER
HSSATLAELF SLAGVPHTEQ AAAAYLDAWT PHTLLDPLAP RLLTELRERG LRVGLLSNTT
WPRERHEAIF ARDGVLDLFD GAVYSSEIPW AKPHPEAFRC ALRAVGDVPP ENAVYVGDRL
YEDVYGARVA GLRAILIPHS EVPEKELVAI EDTTPDAVIY RLDDLLAIID GWNAPGVPVE
GVS
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