Gene Francci3_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1737 
Symbol 
ID3906803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2072186 
End bp2073007 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content76% 
IMG OID637879075 
Producthypothetical protein 
Protein accessionYP_480842 
Protein GI86740442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00159012 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.147089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCATCG CTGTGGGGTC GTTGAAGGCG TCGCCGGGTG CGACGACGCT GGCACTCGCG 
CTGGCGGACC GTTGGCCCGC GGACGCCGGA GACCCCCTTC TGGTAGAGGC CGATCCCGCT
GGCGGCGATC TGGGCGCGCG GTTCGGACTG CTGGCGGGCA GCCGTGGGCT GGTCACGCTC
GCCGCTGCCG GCCGTCGCGG CGGCGGGCAG CGCTCCGCGG CGGACCACGC CCACGAGCTG
CCCGGTGGTC TTGCGGTCAT CCCCGCGCCG GCGGGCGCCG AGCAGGCCAG CCACGTGCTC
GGCGAGCTCG ACGGTGGGGG CTGGTCGCTG CTGTGGTCGG CGGCGCGGTC CGGCGTACGG
ACGGTGATTG TGGACTGCGG TCGGCTCGAT CCGCGGTCGC CCGCGGGGCC GGCGCTGCGG
GCGGCCGATG TGCTGTTGCT CGTCGTGCGC GCGCGAGATG ACGAGCTGGC GCATCTGGCG
GCGCGGATGC ACGTGGTGCA GGGCTGGGCG GTGCCGGCCT GGTATGTGGT CGTCGTCGCC
CAGCCGCACC GGTCCGCGGA CTACCGGGTC CGTGAGATTG CCCGGGTGCT GGGTTCGCGG
GTGCTGGGCC CGGTGCCGTA TGACGCCACG GCCGCGGGGG TGCTCGCCGG CCGTCGCCAG
ACCCGCACCG GGATCGGCCG GTCGAAGCTT GGCCGGACGG TGGCGGGCAT GGCGGACTAT
CTCGCCGCCA CGGTGCCGGT CGGCCCGGAG CGCCCGGCAC TGGTGCCGGG CGGGTTCGAC
GGCCGGGCCG CGTTGCCGCC GACGAGGGCG GTGCGGCGAT GA
 
Protein sequence
MIIAVGSLKA SPGATTLALA LADRWPADAG DPLLVEADPA GGDLGARFGL LAGSRGLVTL 
AAAGRRGGGQ RSAADHAHEL PGGLAVIPAP AGAEQASHVL GELDGGGWSL LWSAARSGVR
TVIVDCGRLD PRSPAGPALR AADVLLLVVR ARDDELAHLA ARMHVVQGWA VPAWYVVVVA
QPHRSADYRV REIARVLGSR VLGPVPYDAT AAGVLAGRRQ TRTGIGRSKL GRTVAGMADY
LAATVPVGPE RPALVPGGFD GRAALPPTRA VRR