Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1737 |
Symbol | |
ID | 3906803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2072186 |
End bp | 2073007 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637879075 |
Product | hypothetical protein |
Protein accession | YP_480842 |
Protein GI | 86740442 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00159012 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.147089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATCATCG CTGTGGGGTC GTTGAAGGCG TCGCCGGGTG CGACGACGCT GGCACTCGCG CTGGCGGACC GTTGGCCCGC GGACGCCGGA GACCCCCTTC TGGTAGAGGC CGATCCCGCT GGCGGCGATC TGGGCGCGCG GTTCGGACTG CTGGCGGGCA GCCGTGGGCT GGTCACGCTC GCCGCTGCCG GCCGTCGCGG CGGCGGGCAG CGCTCCGCGG CGGACCACGC CCACGAGCTG CCCGGTGGTC TTGCGGTCAT CCCCGCGCCG GCGGGCGCCG AGCAGGCCAG CCACGTGCTC GGCGAGCTCG ACGGTGGGGG CTGGTCGCTG CTGTGGTCGG CGGCGCGGTC CGGCGTACGG ACGGTGATTG TGGACTGCGG TCGGCTCGAT CCGCGGTCGC CCGCGGGGCC GGCGCTGCGG GCGGCCGATG TGCTGTTGCT CGTCGTGCGC GCGCGAGATG ACGAGCTGGC GCATCTGGCG GCGCGGATGC ACGTGGTGCA GGGCTGGGCG GTGCCGGCCT GGTATGTGGT CGTCGTCGCC CAGCCGCACC GGTCCGCGGA CTACCGGGTC CGTGAGATTG CCCGGGTGCT GGGTTCGCGG GTGCTGGGCC CGGTGCCGTA TGACGCCACG GCCGCGGGGG TGCTCGCCGG CCGTCGCCAG ACCCGCACCG GGATCGGCCG GTCGAAGCTT GGCCGGACGG TGGCGGGCAT GGCGGACTAT CTCGCCGCCA CGGTGCCGGT CGGCCCGGAG CGCCCGGCAC TGGTGCCGGG CGGGTTCGAC GGCCGGGCCG CGTTGCCGCC GACGAGGGCG GTGCGGCGAT GA
|
Protein sequence | MIIAVGSLKA SPGATTLALA LADRWPADAG DPLLVEADPA GGDLGARFGL LAGSRGLVTL AAAGRRGGGQ RSAADHAHEL PGGLAVIPAP AGAEQASHVL GELDGGGWSL LWSAARSGVR TVIVDCGRLD PRSPAGPALR AADVLLLVVR ARDDELAHLA ARMHVVQGWA VPAWYVVVVA QPHRSADYRV REIARVLGSR VLGPVPYDAT AAGVLAGRRQ TRTGIGRSKL GRTVAGMADY LAATVPVGPE RPALVPGGFD GRAALPPTRA VRR
|
| |