Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1701 |
Symbol | |
ID | 3903278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2041129 |
End bp | 2041665 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637879039 |
Product | hypothetical protein |
Protein accession | YP_480806 |
Protein GI | 86740406 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.019004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0019025 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACTTCG AGTCCCATGT TCTTGTCGAT ATGACCGTCA AGCAGGTCCA GGACGCCCTG GCGAAAGGAG ACCAGCCCGC GATCGCGGTC CTGGAAGGAG AGCCCTCGCG CACGCTGAGT AACTCGGCCT ACCTGCGTGA CCCCGCTCGC GCGGAAGCGT TCGAGCGGCA GGTCGCCGCC GAGGCGAACC GCATCGACCT CGAACGGCTC ATCCTGGCGG TCCCGCAGAT CAGCAGGCCC GTCGTGATCG ACGGCGACGA TGAGGTCCGG CTGCGGTCCC CCTACACCGG CGGGCCGGTG CTGGAGGACG ACGGCGAGAT GCACGTCATC CTCTGGGTGC TCTGGGACGA GGAGGAGGGC CACGAGTCTG GAATGGTGCC CTTCCGGCGC AAGCGCGACG GCACACCCGT GTTCGACGCG TTCGACGGCT CGGACTACAT CTTCTCGATC CCGCTGAACC CCGGGGGCGG GCCCGGCCTG GTCCTGCTGC GGGAACTGCT CGACGAGAAC CTGCAACGGC GACGCGCCCG CCCCTGA
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Protein sequence | MNFESHVLVD MTVKQVQDAL AKGDQPAIAV LEGEPSRTLS NSAYLRDPAR AEAFERQVAA EANRIDLERL ILAVPQISRP VVIDGDDEVR LRSPYTGGPV LEDDGEMHVI LWVLWDEEEG HESGMVPFRR KRDGTPVFDA FDGSDYIFSI PLNPGGGPGL VLLRELLDEN LQRRRARP
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