Gene Francci3_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1701 
Symbol 
ID3903278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2041129 
End bp2041665 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID637879039 
Producthypothetical protein 
Protein accessionYP_480806 
Protein GI86740406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.019004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0019025 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACTTCG AGTCCCATGT TCTTGTCGAT ATGACCGTCA AGCAGGTCCA GGACGCCCTG 
GCGAAAGGAG ACCAGCCCGC GATCGCGGTC CTGGAAGGAG AGCCCTCGCG CACGCTGAGT
AACTCGGCCT ACCTGCGTGA CCCCGCTCGC GCGGAAGCGT TCGAGCGGCA GGTCGCCGCC
GAGGCGAACC GCATCGACCT CGAACGGCTC ATCCTGGCGG TCCCGCAGAT CAGCAGGCCC
GTCGTGATCG ACGGCGACGA TGAGGTCCGG CTGCGGTCCC CCTACACCGG CGGGCCGGTG
CTGGAGGACG ACGGCGAGAT GCACGTCATC CTCTGGGTGC TCTGGGACGA GGAGGAGGGC
CACGAGTCTG GAATGGTGCC CTTCCGGCGC AAGCGCGACG GCACACCCGT GTTCGACGCG
TTCGACGGCT CGGACTACAT CTTCTCGATC CCGCTGAACC CCGGGGGCGG GCCCGGCCTG
GTCCTGCTGC GGGAACTGCT CGACGAGAAC CTGCAACGGC GACGCGCCCG CCCCTGA
 
Protein sequence
MNFESHVLVD MTVKQVQDAL AKGDQPAIAV LEGEPSRTLS NSAYLRDPAR AEAFERQVAA 
EANRIDLERL ILAVPQISRP VVIDGDDEVR LRSPYTGGPV LEDDGEMHVI LWVLWDEEEG
HESGMVPFRR KRDGTPVFDA FDGSDYIFSI PLNPGGGPGL VLLRELLDEN LQRRRARP