Gene Francci3_1699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1699 
Symbol 
ID3903276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2040073 
End bp2040555 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content70% 
IMG OID637879037 
Producthypothetical protein 
Protein accessionYP_480804 
Protein GI86740404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.141511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0018329 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACGACG CCACCTGGAG CCTGGTGACC GACGTCGTGG ACCGCGTCCA GCAGTCCATC 
CGGATGACCG ACTATCCGGC GATCGTCATC CTCGACGGGG ACCGCCGCCA GATCCTGTCC
GACTATGACT ACGTCCAGAG TGAGACCGCT CGGACCGGCT TCGAGACCCG TGCGGCCGAG
CTCGCCCGCA CCCTGCACGC CCGCCGGTTC ACCTTCGCCG TCCCGCAGAT CATCGAGACG
GTCCCTGGCA GCCTCGAAGC CCACGCGTTC TCCGTCCGGC CCCTGCGTGA CGGCGAGCAG
GAGAGCGTGG TCTGGACGGC CTACGACGCC GACGACGGCG TCGACTACGG CTGGGCCCCC
TACACCCGCC GGCCAGGCGG CCAGCCCGTC TTCGACGAGC CCACCACGTT TCACCTGCGG
GCCCTGTCCA CCGACGGCTT CCCCGGCGTC CGTCTGCTCC GCCTTCTCAC CGACGACGAG
TAG
 
Protein sequence
MNDATWSLVT DVVDRVQQSI RMTDYPAIVI LDGDRRQILS DYDYVQSETA RTGFETRAAE 
LARTLHARRF TFAVPQIIET VPGSLEAHAF SVRPLRDGEQ ESVVWTAYDA DDGVDYGWAP
YTRRPGGQPV FDEPTTFHLR ALSTDGFPGV RLLRLLTDDE