Gene Francci3_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1678 
Symbol 
ID3903065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2013257 
End bp2014672 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content70% 
IMG OID637879016 
Productpyruvate kinase 
Protein accessionYP_480783 
Protein GI86740383 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0469] Pyruvate kinase 
TIGRFAM ID[TIGR01064] pyruvate kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0855403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCGTA GAGCCAAGAT TGTTTGTACC CTCGGCCCCG CGACCAGCTC GCCAGAGAAG 
GTCCGGGCCC TCGTCGACGC GGGAATGGAC ATTGCCCGAC TAAACTTCTC CCACGGAACA
CACGAACAGC ATGCCGTCAC TTACGCGCGG GTGCGCGAGG CCGCGGAGGC GGCCGGCCGC
AGCGTCGGCA CGCTCGCCGA CCTCCAGGGA CCGAAAATCC GGCTGGGGAA CTTCGCCGAC
GGCGGGGTCA CCCTGCTGCC CGGTCAGCGG TTCACCGTCA CGATCCGCGA TGTTCCCGGC
GATCAGCATC AGGTCGGCAC GACCTACCCG GGCCTGCCGG GCGACGTCGC GGCCGGGGAT
CGCGTCCTGG TCGACGACGG CCGCCTGGTC CTGCAGATCG ACGGGGTGAC TGACACCGAC
GTCCACACCA CGGTCGTTGT CGGCGGGCCG GTGAGCGACC ACAAGGGGAT GAACATTCCC
AACGCCGCGC TCACCGTCCC GGCGCTCACC GAGAAGGACG CCGCTGACCT GCGGTTCGCT
CTCAACCTCG GGGTGGACAT GGTCGCACTG TCCTTCGTCC GGAGCGCCGT GGACGCCGCG
GCGGTGCATG CGATCATGGA TGAGGTGGGG ATCCGGGTTC CGGTCCACGC CAAGATCGAG
AAGCCGCAGG CGGTCGCCGA ACTCGACGAG ATCATCGAGG CGTTCGACGG TCTGATGATC
GCCCGTGGCG ATCTCGGGGT CGAGCTGCCG CTCGAGGACG TGCCGCTCGT GCAGAAGCGC
GCCGTCAGCC AGGCCCGGGA GCGGGCCAAG CCGGTGATCG TCGCGACCCA GGTGCTCGAG
TCCATGGTCA GCGCGCCGCG GCCGACCCGT GCCGAGGCCA GTGACTGCGC CAACGCCGTC
CTGGACGGCG CTGACGCGAT CATGCTGTCG GCGGAGACGA GCGTCGGTGC CTACCCCATC
GAGGCCACGG CCACCATGGC GCGCATCATC GAGACCGCCG AGGCCGACCT CGGCCGGATA
CCGCCCCTGC GGACCGAACC GCGCACGCTC GGTGGGGCAC TCGCCCAGGC CGCCGCGTCG
GTAGGAGCCG CGGTCGGCGC CCGTTACCTC GTGGCCCACA CCCTCAGTGG TGACACGGCC
CGGCGACTCG CCCGGTACCG TACCGAGGTC CCGGTGCTGG CCTTCACGCC GATTCCGGCT
GTCCGCAACC AGATGGCGCT CTTCTGGGGC GTGGAAACCT TCCTCGTGCC GTTCGCGGAC
AGCACGGACG AGATGGTCCG CCAGGTCGAC AGCGCCCTCT TCCATATTGG CCGATGCAAG
CCGGGTGAAC TGGTGGTCGT CGTCGCCGGG ACGCCGCCGG GCGTGGCCGG CATGACCAAC
ATGATGCGGG TCCATCGCAT CGGGGAGGCC ATCTGA
 
Protein sequence
MPRRAKIVCT LGPATSSPEK VRALVDAGMD IARLNFSHGT HEQHAVTYAR VREAAEAAGR 
SVGTLADLQG PKIRLGNFAD GGVTLLPGQR FTVTIRDVPG DQHQVGTTYP GLPGDVAAGD
RVLVDDGRLV LQIDGVTDTD VHTTVVVGGP VSDHKGMNIP NAALTVPALT EKDAADLRFA
LNLGVDMVAL SFVRSAVDAA AVHAIMDEVG IRVPVHAKIE KPQAVAELDE IIEAFDGLMI
ARGDLGVELP LEDVPLVQKR AVSQARERAK PVIVATQVLE SMVSAPRPTR AEASDCANAV
LDGADAIMLS AETSVGAYPI EATATMARII ETAEADLGRI PPLRTEPRTL GGALAQAAAS
VGAAVGARYL VAHTLSGDTA RRLARYRTEV PVLAFTPIPA VRNQMALFWG VETFLVPFAD
STDEMVRQVD SALFHIGRCK PGELVVVVAG TPPGVAGMTN MMRVHRIGEA I