Gene Francci3_1665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1665 
Symbol 
ID3903052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1999623 
End bp2000141 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID637879003 
ProductSUF system FeS assembly protein 
Protein accessionYP_480770 
Protein GI86740370 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.754519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTCG ACTCCATGTA CCAGGAGATC ATCCTGGACC ACTACCGCAA CCCGCTCCAC 
CGGGGGCTGC GGGATCCCTT CGACGCCGAA GTGCACCACG TCAACCCGAC CTGCGGCGAC
GAGGTGACCC TGCGGGTGAA GGTCTCGGAC GGGGTCGTCG AGGACGTCTC CTACGAGAGC
GAGGGCTGTT CGATCAGTCA GGCGTCGGCG AGCGTCATGA GCGACCTCGT GATCGGCAAG
TCGGTCGACG CGGCGCTGAA GCTCGAACGC GAGTTCCTGG CGCTGATGCA GTCGCGGGGC
ACCATCGAGG GTGACGAGGA CGTGCTGGAG GACGCCGTGG CGTTCGCCGG CGTCTCCAAG
TACCCCGCCC GGGTGAAATG TGCCCTGCTG TCCTGGATGG CGTGGAAGGA CGCGACCGCT
AAGGCGATGG ATCCGAGTGT CGCCGTCGCC GGCGCATCCA CCTCTGTCGC GTACCCCCGC
GTCGCCCCCC TCGACGTACC CGAGCAGGAG AAGCCATGA
 
Protein sequence
MKLDSMYQEI ILDHYRNPLH RGLRDPFDAE VHHVNPTCGD EVTLRVKVSD GVVEDVSYES 
EGCSISQASA SVMSDLVIGK SVDAALKLER EFLALMQSRG TIEGDEDVLE DAVAFAGVSK
YPARVKCALL SWMAWKDATA KAMDPSVAVA GASTSVAYPR VAPLDVPEQE KP