Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1665 |
Symbol | |
ID | 3903052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1999623 |
End bp | 2000141 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637879003 |
Product | SUF system FeS assembly protein |
Protein accession | YP_480770 |
Protein GI | 86740370 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR01994] SUF system FeS assembly protein, NifU family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.754519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACTCG ACTCCATGTA CCAGGAGATC ATCCTGGACC ACTACCGCAA CCCGCTCCAC CGGGGGCTGC GGGATCCCTT CGACGCCGAA GTGCACCACG TCAACCCGAC CTGCGGCGAC GAGGTGACCC TGCGGGTGAA GGTCTCGGAC GGGGTCGTCG AGGACGTCTC CTACGAGAGC GAGGGCTGTT CGATCAGTCA GGCGTCGGCG AGCGTCATGA GCGACCTCGT GATCGGCAAG TCGGTCGACG CGGCGCTGAA GCTCGAACGC GAGTTCCTGG CGCTGATGCA GTCGCGGGGC ACCATCGAGG GTGACGAGGA CGTGCTGGAG GACGCCGTGG CGTTCGCCGG CGTCTCCAAG TACCCCGCCC GGGTGAAATG TGCCCTGCTG TCCTGGATGG CGTGGAAGGA CGCGACCGCT AAGGCGATGG ATCCGAGTGT CGCCGTCGCC GGCGCATCCA CCTCTGTCGC GTACCCCCGC GTCGCCCCCC TCGACGTACC CGAGCAGGAG AAGCCATGA
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Protein sequence | MKLDSMYQEI ILDHYRNPLH RGLRDPFDAE VHHVNPTCGD EVTLRVKVSD GVVEDVSYES EGCSISQASA SVMSDLVIGK SVDAALKLER EFLALMQSRG TIEGDEDVLE DAVAFAGVSK YPARVKCALL SWMAWKDATA KAMDPSVAVA GASTSVAYPR VAPLDVPEQE KP
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