Gene Francci3_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1660 
Symbol 
ID3903047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1994453 
End bp1995865 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content67% 
IMG OID637878998 
ProductFeS assembly protein SufB 
Protein accessionYP_480765 
Protein GI86740365 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0336452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT CTGCCGAGAC CGCCCTGGAA GGCCTTGGTT CCTATCGGTT CGGATGGGCT 
GACACCGACG CCTACGCCGC CGACGTGGAG CGCGGCCTGT CCGAGGCGGT TGTCCGCGGC
ATCTCGGCCA AGAAGTCCGA GCCGTCGTGG ATGACCGACC TGCGCCTCAA GGGGCTGCGG
CTGTTCGAGC GCAAGCCCAT GCCGACCTGG GGTGCCGACC TGTCGGGCAT CGACTTCGAC
AACATCAAGT ACTTCGTCCG CTCCACCGAG AAGCAGGCCG AGGAGTGGGA GGACCTACCC
GAGGACATCC GGGCGACCTA CGACCGGCTC GGCATTCCCG AGGCGGAGAA GCAGCGCCTC
ATTGCCGGGG TCGCCGCCCA GTACGAGTCC GAGGTCGTCT ACCACAAGAT CCGGGAGGAC
CTCGAGGAGC AGGGTGTCCT CTTCCTGGAC ACCGACTCCG GGCTGCGTGA GCATCCGGAG
CTGTTCCAGG AGTACTTCGG CTCGGTGATC CCGGTCGGGG ACAACAAGTT CGCCGCGCTG
AACACGGCGG TGTGGTCGGG CGGATCCTTC ATCTACGTGC CGCCGGGCGT GCAGGTCGAG
ATCCCGCTGC AGGCCTACTT CCGGATCAAC ACCGAGAACA TGGGCCAGTT CGAGCGGACG
CTGATCATCG TCGACGAGGG CGCCTACGTG CACTACGTCG AGGGCTGCAC GGCGCCGGTC
TACTCGTCGG ACTCGCTGCA CTCGGCGGTC GTCGAAATCG TCGTGAAGAA GAACGCGCGC
TGCCGGTACA CGACCATCCA GAACTGGTCG AACAACGTCT ACAACCTGGT CACCAAGCGT
GCCGCCTGCC ACGAGGGCGG CACCATGGAG TGGATCGACG GCAACATCGG TTCCAAGGTG
ACGATGAAGT ACCCGGCCGT GTGGCTGCTC GGCGAGCACG CCAAGGGCGA GGTGCTCTCC
ATCGCCTTCG CCGGTGCCGG TCAGCACCAG GACGCGGGCG CGAAGATGGT GCACGCCGCG
CCCCGCACCT CCTCGACGAT CGTCTCCAAG TCGGTGGCCC GCGGCGGCGG GCGGACGTCC
TACCGCGGGC TCGTCCAGAT CAACGAGGGC TCGTCGGCCT CCCGCTCGAC GGTCAAGTGC
GACGCGTTGC TCGTCGACAC GGTGAGCCGC TCGGACACCT ACCCCTACGT TGACGTGCGC
GAGGACGACG CCTCCATCGG GCACGAGGCG AGCGTCTCCA AGGTCGGCGA GGACCAGCTG
TTCTACCTGA TGAGCCGGGG TCTGTCCGAG GAGGAGGCGA TGGCGATGGT CGTGCGCGGC
TTCGTCGAGC CGATCGCCCG GGAGCTGCCC ATGGAGTACG CCCTCGAGCT CAACCGCCTC
ATCGAGCTGC AGATGGAAGG TGCGGTCGGC TGA
 
Protein sequence
MTTSAETALE GLGSYRFGWA DTDAYAADVE RGLSEAVVRG ISAKKSEPSW MTDLRLKGLR 
LFERKPMPTW GADLSGIDFD NIKYFVRSTE KQAEEWEDLP EDIRATYDRL GIPEAEKQRL
IAGVAAQYES EVVYHKIRED LEEQGVLFLD TDSGLREHPE LFQEYFGSVI PVGDNKFAAL
NTAVWSGGSF IYVPPGVQVE IPLQAYFRIN TENMGQFERT LIIVDEGAYV HYVEGCTAPV
YSSDSLHSAV VEIVVKKNAR CRYTTIQNWS NNVYNLVTKR AACHEGGTME WIDGNIGSKV
TMKYPAVWLL GEHAKGEVLS IAFAGAGQHQ DAGAKMVHAA PRTSSTIVSK SVARGGGRTS
YRGLVQINEG SSASRSTVKC DALLVDTVSR SDTYPYVDVR EDDASIGHEA SVSKVGEDQL
FYLMSRGLSE EEAMAMVVRG FVEPIARELP MEYALELNRL IELQMEGAVG