Gene Francci3_1656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1656 
Symbol 
ID3903043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand- 
Start bp1990029 
End bp1990586 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content74% 
IMG OID637878994 
ProductXRE family transcriptional regulator 
Protein accessionYP_480761 
Protein GI86740361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.45225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCGGA CGGAGACCGT GACCGAGGCG GACTACGCCC TGGAGCTCGG CCGCCGGCTT 
CGCGCGGCGC GCAACCGGCG TGGCTTGTCG CTGCTGGACG TCCAGGAGCG CACGCATGGC 
CGGTGGACTG CCGGGACCCT GGGCGCCTAC GAGCGAGGCT CTCGGACCCT GCGCGTGCAT 
CGACTGGTCG AGCTCGCCGA GCTGTACGAC GTTCCCGCGA CGCTGCTGGT ACCGCCGGCC 
GCCGATCGCC GCGAGACCGA CCATCTGCCG CCGCTGGTCA TCGACCTGCG CCGGCTGCGC 
AAGCTGCCCC CGACCCGCAC CGGACCGCTG CGGCGCTGGA TCGCCATCGT GCAGGTCCTG 
CGGTCGGACA GTTCACGCGA CGTCCTGCGG CTGCGTCGCT CCGACCTGCA GTCGTTGTCC 
CGGCTCTACA GCACCACGCC GGCGATGCTG TACGAGCGGC TGGGCGCCTG GGGAGCGCTG 
GTGGAGCCAG GCGAGCCGGT GGCGGTCGGC GGGCGCCGCC GGGCGCTGCC CGTCCGCCCG 
CCGCAGCAAC GGGGCTAG
 
Protein sequence
MTRTETVTEA DYALELGRRL RAARNRRGLS LLDVQERTHG RWTAGTLGAY ERGSRTLRVH 
RLVELAELYD VPATLLVPPA ADRRETDHLP PLVIDLRRLR KLPPTRTGPL RRWIAIVQVL 
RSDSSRDVLR LRRSDLQSLS RLYSTTPAML YERLGAWGAL VEPGEPVAVG GRRRALPVRP 
PQQRG