Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1644 |
Symbol | |
ID | 3905923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1977665 |
End bp | 1978054 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637878982 |
Product | putative integral membrane protein |
Protein accession | YP_480749 |
Protein GI | 86740349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00795689 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCCCG ATTTTCCGCT ACTCAGTGTC TTCCTCTATA TGCTGTGGTT TTTTGCTTTC ATCCTGTGGC TGTGGCTGCT GTTTGCGGTG ATCATGGATG TGTTCCGCAG CCAGGATCTG TCCGGATGGG CGAAGGCCGC CTGGACGGTC GCGATCGTGG TGCTGCCCTG GCTCGGCGTG ATCGCCTACC TGATCGTGCG GGGTGGCAGC ATGCACGAGC GCAGCCGCGC CGCGGCGCAG CGCGACGAAC AGGCCTGGCG CGCCTACCTC CAGGAGGCCG CCGGGACAAC GAGCGACGCC GACGAACTCG GCAAGCTCGC GCACCTGCGC GACCGGGGGA TCATCAGCGA GGCCGAGTTC GAGCGGGGCA AGACCAAGAT CCTGACCTGA
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Protein sequence | MDPDFPLLSV FLYMLWFFAF ILWLWLLFAV IMDVFRSQDL SGWAKAAWTV AIVVLPWLGV IAYLIVRGGS MHERSRAAAQ RDEQAWRAYL QEAAGTTSDA DELGKLAHLR DRGIISEAEF ERGKTKILT
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