Gene Francci3_1644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1644 
Symbol 
ID3905923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1977665 
End bp1978054 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content65% 
IMG OID637878982 
Productputative integral membrane protein 
Protein accessionYP_480749 
Protein GI86740349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00795689 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCCCG ATTTTCCGCT ACTCAGTGTC TTCCTCTATA TGCTGTGGTT TTTTGCTTTC 
ATCCTGTGGC TGTGGCTGCT GTTTGCGGTG ATCATGGATG TGTTCCGCAG CCAGGATCTG
TCCGGATGGG CGAAGGCCGC CTGGACGGTC GCGATCGTGG TGCTGCCCTG GCTCGGCGTG
ATCGCCTACC TGATCGTGCG GGGTGGCAGC ATGCACGAGC GCAGCCGCGC CGCGGCGCAG
CGCGACGAAC AGGCCTGGCG CGCCTACCTC CAGGAGGCCG CCGGGACAAC GAGCGACGCC
GACGAACTCG GCAAGCTCGC GCACCTGCGC GACCGGGGGA TCATCAGCGA GGCCGAGTTC
GAGCGGGGCA AGACCAAGAT CCTGACCTGA
 
Protein sequence
MDPDFPLLSV FLYMLWFFAF ILWLWLLFAV IMDVFRSQDL SGWAKAAWTV AIVVLPWLGV 
IAYLIVRGGS MHERSRAAAQ RDEQAWRAYL QEAAGTTSDA DELGKLAHLR DRGIISEAEF
ERGKTKILT