| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1639 |
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| Symbol | tpiA |
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| ID | 3905918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1971853 |
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| End bp | 1972779 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878977 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_480744 |
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| Protein GI | 86740344 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.766552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCTGC TGGGCCGGGG AAGATCTGAG CGAGGTTCCG ACAGGGGATC CGGGAAGAAC
AGGGGATCCG GGAAGGACGA GGACGGCGTG GGCAAGGACA GGTCGGTGAA GGGCGCTGCC
GGTTCAAAGG GCGCCGCCGG CGTCAAGGGC ACCGGCCGAC GGACGCTGGT AGCCGGCAAC
TGGAAGATGA ACCTCAATCA CCTCGAGGCG ATCGCGCTGG TGCAGAAGAT CGCCTTCGAT
CTCAAGCCCG CCGAGCTGGA GACCGTCGAG GTCGTCGTTC TCCCGCCGTT CACCGATCTG
CGCAGCGTGC AGACCCTGGT GGACGGGGAC AAGCTCGCCA TCGCCTACGG CGGGCAGGAC
CTCTCCCCCT ACGCGTCGGG TGCGCACACC GGTGACATCA GCGGGGCGAT GCTGGCCAAG
CTCGGCTGCG ACTACGTCGT CGTCGGGCAC TCCGAGCGCC GGGCCGACCA CCACGAGGAC
GACGCGCTGG TGGCGGCCAA GGCGAAGGCG GCCTTCTCCG TGGGGCTCAC CCCTATCCTG
TGCGTGGGGG AGCCCGAGGA GATCCGGGCC GCCGGCACCC AGGTCGAGCA CGTGCTGCGT
CAGCTCGAGC GGTCGCTGGC TGGCATCACC GCCGAGCAGG CCGCGACGAT CGTCATCGCC
TACGAGCCGG TGTGGGCGAT CGGCACTGGC CGCACCGCCT CCGCGCAGGA CGCCCAGGAC
ATGTGCGCGG CGGTCCGCGG CCAGCTGGCC AGTCAGTACG GCGATGAGAT CGCCGCGGGG
ATCCGTGTCC TCTACGGCGG CTCGGTGAAG GCAGCGAACG CCGGCGAGCT GTTCACCATG
CCGGACGTGG ACGGCGGGCT GGTCGGCGGG GCGAGCCTGG TCGCCGAGGA GTTCGTCGGC
ATCGTGCGCA GCGGGCCGCC GGCCTGA
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| Protein sequence | MALLGRGRSE RGSDRGSGKN RGSGKDEDGV GKDRSVKGAA GSKGAAGVKG TGRRTLVAGN
WKMNLNHLEA IALVQKIAFD LKPAELETVE VVVLPPFTDL RSVQTLVDGD KLAIAYGGQD
LSPYASGAHT GDISGAMLAK LGCDYVVVGH SERRADHHED DALVAAKAKA AFSVGLTPIL
CVGEPEEIRA AGTQVEHVLR QLERSLAGIT AEQAATIVIA YEPVWAIGTG RTASAQDAQD
MCAAVRGQLA SQYGDEIAAG IRVLYGGSVK AANAGELFTM PDVDGGLVGG ASLVAEEFVG
IVRSGPPA
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