Gene Francci3_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1638 
Symbolpgk 
ID3905917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1970581 
End bp1971783 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content74% 
IMG OID637878976 
Productphosphoglycerate kinase 
Protein accessionYP_480743 
Protein GI86740343 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGACGA TCGACGACCT GCAGGTCGCC GGGCACCGAG TGCTGGTCCG CAGTGACCTG 
AACGTGCCGC TGGATCGTTC CGGTGACACC CCGCGCATCA CCGACGACGG CCGGGTCCGC
GCCAGCGTCC CGACCATCTC CGCGCTGCTG GACCGGGGCG CCCGGGTGGT CGTGAGCTCG
CACCTGGGCC GGCCGAAGGG CGAACCGGAC CCGAAGTACT CCTTGGAGCC GGTGGCGGGT
CGGCTCGCCG AGCTGCTGGG CCGGCCGGTG GCGTTCGCCG GCGACGGCAG CGGTGACATC
GCCGGTGCGC ATGCCCGCGA GGTGGTCGCC GGACTCGGGG ACGGCGAGGT GGCCCTGCTG
GAGAACCTGC GCTTCGCCGC CGGGGAGACC AGCAAGGACG CGGCGATCCG CGCGGCTTTC
GCCGACGAGC TGTCGGCGCT CGCCGAGTTC TACGTCGGGG ACGCCTTCGG CGCGGTCCAC
CGGGCCCATG CCAGCGTCGC CGACGTCCCG AAGCGGCTGC CGCACGCCGC GGGTCGGCTC
GTGCTTACCG AGCTGGAAGT GCTCCGCCGG CTCAGCAGCG ACCCGGCGCG TCCCTACAGT
GTCGTGCTCG GCGGGTCCAA GGTGTCCGAC AAGCTCGGCG TGATCCGCGC GCTGCTGCCC
AAGGTCGACG CGTTGCTCGT CGGCGGGGGG ATGTGCTTCA CCTTCCTGGC GGCGCTCGGT
CACGGGGTCG GCGGGTCGCT GCTGGAGACC GAGATGATCG AAACGTGCAA GGAGCTGCTC
GCCGAGGGCG GGGAGCGGAT CGTGCTGCCG ACCGACGTCG TCGTCGCGGA CAGGTTCGCC
GCCGACGCGG ACACCGCCGT CGTCGCGGCT GACGCCATCC CCGCCGGCTG GCTCGGGCTC
GACATCGGCC CGGCGTCGAC GGAGCTGTTC GCCGCGCGGC TGGCCGGAGC GGCCACGGTC
TTCTGGAACG GGCCGATGGG CGTGTTCGAG CTCGCGCCGT TCGCCGCGGG CACCCGGGGG
GTGGCCGAGG CGGTCGCCGC CGGCAAGGGG TTCTCCGTCG TGGGTGGCGG CGACTCCGCC
GCGGCGGTCC GCACGCTCGG CATCCCGGAG GATGCCTTCA GTCACATCTC GACCGGCGGC
GGCGCGAGCC TGGAATACCT GGAGGGCAAG ACGCTGCCCG GGCTCGCGGC CCTCGATGTC
TGA
 
Protein sequence
MRTIDDLQVA GHRVLVRSDL NVPLDRSGDT PRITDDGRVR ASVPTISALL DRGARVVVSS 
HLGRPKGEPD PKYSLEPVAG RLAELLGRPV AFAGDGSGDI AGAHAREVVA GLGDGEVALL
ENLRFAAGET SKDAAIRAAF ADELSALAEF YVGDAFGAVH RAHASVADVP KRLPHAAGRL
VLTELEVLRR LSSDPARPYS VVLGGSKVSD KLGVIRALLP KVDALLVGGG MCFTFLAALG
HGVGGSLLET EMIETCKELL AEGGERIVLP TDVVVADRFA ADADTAVVAA DAIPAGWLGL
DIGPASTELF AARLAGAATV FWNGPMGVFE LAPFAAGTRG VAEAVAAGKG FSVVGGGDSA
AAVRTLGIPE DAFSHISTGG GASLEYLEGK TLPGLAALDV