Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1638 |
Symbol | pgk |
ID | 3905917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1970581 |
End bp | 1971783 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637878976 |
Product | phosphoglycerate kinase |
Protein accession | YP_480743 |
Protein GI | 86740343 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGACGA TCGACGACCT GCAGGTCGCC GGGCACCGAG TGCTGGTCCG CAGTGACCTG AACGTGCCGC TGGATCGTTC CGGTGACACC CCGCGCATCA CCGACGACGG CCGGGTCCGC GCCAGCGTCC CGACCATCTC CGCGCTGCTG GACCGGGGCG CCCGGGTGGT CGTGAGCTCG CACCTGGGCC GGCCGAAGGG CGAACCGGAC CCGAAGTACT CCTTGGAGCC GGTGGCGGGT CGGCTCGCCG AGCTGCTGGG CCGGCCGGTG GCGTTCGCCG GCGACGGCAG CGGTGACATC GCCGGTGCGC ATGCCCGCGA GGTGGTCGCC GGACTCGGGG ACGGCGAGGT GGCCCTGCTG GAGAACCTGC GCTTCGCCGC CGGGGAGACC AGCAAGGACG CGGCGATCCG CGCGGCTTTC GCCGACGAGC TGTCGGCGCT CGCCGAGTTC TACGTCGGGG ACGCCTTCGG CGCGGTCCAC CGGGCCCATG CCAGCGTCGC CGACGTCCCG AAGCGGCTGC CGCACGCCGC GGGTCGGCTC GTGCTTACCG AGCTGGAAGT GCTCCGCCGG CTCAGCAGCG ACCCGGCGCG TCCCTACAGT GTCGTGCTCG GCGGGTCCAA GGTGTCCGAC AAGCTCGGCG TGATCCGCGC GCTGCTGCCC AAGGTCGACG CGTTGCTCGT CGGCGGGGGG ATGTGCTTCA CCTTCCTGGC GGCGCTCGGT CACGGGGTCG GCGGGTCGCT GCTGGAGACC GAGATGATCG AAACGTGCAA GGAGCTGCTC GCCGAGGGCG GGGAGCGGAT CGTGCTGCCG ACCGACGTCG TCGTCGCGGA CAGGTTCGCC GCCGACGCGG ACACCGCCGT CGTCGCGGCT GACGCCATCC CCGCCGGCTG GCTCGGGCTC GACATCGGCC CGGCGTCGAC GGAGCTGTTC GCCGCGCGGC TGGCCGGAGC GGCCACGGTC TTCTGGAACG GGCCGATGGG CGTGTTCGAG CTCGCGCCGT TCGCCGCGGG CACCCGGGGG GTGGCCGAGG CGGTCGCCGC CGGCAAGGGG TTCTCCGTCG TGGGTGGCGG CGACTCCGCC GCGGCGGTCC GCACGCTCGG CATCCCGGAG GATGCCTTCA GTCACATCTC GACCGGCGGC GGCGCGAGCC TGGAATACCT GGAGGGCAAG ACGCTGCCCG GGCTCGCGGC CCTCGATGTC TGA
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Protein sequence | MRTIDDLQVA GHRVLVRSDL NVPLDRSGDT PRITDDGRVR ASVPTISALL DRGARVVVSS HLGRPKGEPD PKYSLEPVAG RLAELLGRPV AFAGDGSGDI AGAHAREVVA GLGDGEVALL ENLRFAAGET SKDAAIRAAF ADELSALAEF YVGDAFGAVH RAHASVADVP KRLPHAAGRL VLTELEVLRR LSSDPARPYS VVLGGSKVSD KLGVIRALLP KVDALLVGGG MCFTFLAALG HGVGGSLLET EMIETCKELL AEGGERIVLP TDVVVADRFA ADADTAVVAA DAIPAGWLGL DIGPASTELF AARLAGAATV FWNGPMGVFE LAPFAAGTRG VAEAVAAGKG FSVVGGGDSA AAVRTLGIPE DAFSHISTGG GASLEYLEGK TLPGLAALDV
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