Gene Francci3_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1634 
Symbol 
ID3905913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1965989 
End bp1966858 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content71% 
IMG OID637878972 
Producthypothetical protein 
Protein accessionYP_480739 
Protein GI86740339 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.740621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CGACCCTGGA TCTGGCGATC ATCACCGGGC TGTCCGGCGC CGGGCGCAGC 
ACCGCGGCGA AGTGTCTGGA GGACCTGGGC TGGTTCGTCG TCGACAACCT TCCCCCGGAG
CTGCTGTCCA CCATGGCTGA GCTGGGCCGT CGTTCCGGTG GGGCAATCAG CCGCATCGCC
GTCGTGGTGG ACGTGCGGGG CCGGCCGTTT TTCTCTGACC TGCGCGCCGC GATCGCGGCG
CTCGACGCGC GGGGCATGCA TCCCCGGATG CTGTTCCTCG AGGCCAGCGA CGACGCGCTG
ATCCGCCGGT TCGAGCACGT CCGCCGGCCG CATCCGCTGC AGCGCGACGA GCGGGTGGTC
GACGGCATCG GCCGGGAACG GATTCTGCTC GCCGAGCTGC GCGGCGAGGC CGACCTGGTC
CTCGACACCA CCGACCTGAA CGTCCACGAG TTGCGGTCGA AGATCGACGC CGCGTTCGGG
CAGCCGAACG CCAACCGGCT CAACGCCACG GTGGTGTCGT TCGGGTACAA GTACGGACTT
CCGCTGGATG CGGATCTCGT CGCCGACTGC CGGTTCCTGC CCAACCCGCA CTGGGTGGAG
GCGCTGCGCC CGTTCACCGG CCGCGATCCG CAGGTGCGCG ACTATGTGCT GGCCCAGCCG
GGAGCGCAGG ACTTCCTCGA CCAGTACTCG GCGCTGCTCC GCCTGGTCGG CGAGGGTTAC
GCCCGTGAGG GCAAGCGGTA TCTCACGCTG GCCGTCGGGT GCACCGGCGG CAAGCACCGT
AGCGTCGCGA TCGCCGAGCA GCTCGGCATC CGGCTCGCCG CGGGCGGCGT GGGAGTCCGG
GTGGTGCACC GTGACCTGGG ACGGGAGTGA
 
Protein sequence
MTTPTLDLAI ITGLSGAGRS TAAKCLEDLG WFVVDNLPPE LLSTMAELGR RSGGAISRIA 
VVVDVRGRPF FSDLRAAIAA LDARGMHPRM LFLEASDDAL IRRFEHVRRP HPLQRDERVV
DGIGRERILL AELRGEADLV LDTTDLNVHE LRSKIDAAFG QPNANRLNAT VVSFGYKYGL
PLDADLVADC RFLPNPHWVE ALRPFTGRDP QVRDYVLAQP GAQDFLDQYS ALLRLVGEGY
AREGKRYLTL AVGCTGGKHR SVAIAEQLGI RLAAGGVGVR VVHRDLGRE