| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1628 |
|---|
| Symbol | |
|---|
| ID | 3905907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1956940 |
|---|
| End bp | 1957944 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637878966 |
|---|
| Product | integral membrane protein TerC |
|---|
| Protein accession | YP_480733 |
|---|
| Protein GI | 86740333 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTACGTGC CCCCCTGGGC TTGGGCCGCC TTCGTCGGCG TCCTGCTCAC ACTCCTGACC
ATCGACCTGC TGGCACATCG TCGGGCTCAC GTCATCGGCT TTCGCGAGGC CGCGTGGTGG
AGCGTTCTGT GGGTCTCGCT GGGCATCGGA TTCGCCGGTG TCATCTGGGC CTGGCAGGGC
CCGGGGCCCG CCGGCGAGTA CGCCGCCGCG TGGCTGCTGG AAAAGAGCCT GTCCGTCGAC
AACCTCTTCG TCTTCGCGCT GATCTTCTCT TATTTCAAGG TGCCTCGCGC CTACCAGCAC
CGCGTCCTGT TCTACGGTGT GCTGGGAGCG CTTGTGCTCC GTTTCCTGTT CATTGCGGCC
GGCATCGCGC TGCTCGAACG GTTCAGCTTT GTCATCTACG TCTTCGGGGC TTTTCTGCTC
TACACGGCGG TCACGATGCT CCGGGGCGAC GGCGTCGAGA TGGATCCGGG CCGAAGCAGG
GCGGTCGCGC TGCTTCGCAA GGTCATTCCG GTCACCGACG ACTATCAGGG GCAGCGTTTC
GTGTTTCGGC GTGCCGGGAA GCTGGTCGCC ACGCCGCTAC TGGCCGTCCT CGTCGTGATC
GAGACCGCCG ACGTCCTGTT CGCGTTCGAC TCGGTGCCCG CCGCGCTCGG TGTGACCGAC
AAGGTGTTCC TGGTCTACAC GAGCAACGCC CTGGCCATCC TGGGGCTGCG GTCGTTGTTC
TTCCTGCTCT CCGGTCTGAT GGAACGTTTC CACCACCTGG CGACGGGGCT CGCGTTCATC
CTGGCCTTCA TCGGCGTGAA GATGTTGCTC ACCGACGTGT GGCACCCGCC GATCGCGCTG
TCGCTCGGTG TCATTGTGGT GACATTGATC GTGGCCATCG TCTGGTCGCT GCGCACCACC
CCGCCGGCCC CGCGGTCCGT GGCCGAGCCG GAGGGGGTAA CCAAGCCGGA GGGGGTAGCC
GAGCCGGGGG GCGTGGCCGA AGGCTCCCAG GAGGTGCCCC GATGA
|
|---|
| Protein sequence | MYVPPWAWAA FVGVLLTLLT IDLLAHRRAH VIGFREAAWW SVLWVSLGIG FAGVIWAWQG
PGPAGEYAAA WLLEKSLSVD NLFVFALIFS YFKVPRAYQH RVLFYGVLGA LVLRFLFIAA
GIALLERFSF VIYVFGAFLL YTAVTMLRGD GVEMDPGRSR AVALLRKVIP VTDDYQGQRF
VFRRAGKLVA TPLLAVLVVI ETADVLFAFD SVPAALGVTD KVFLVYTSNA LAILGLRSLF
FLLSGLMERF HHLATGLAFI LAFIGVKMLL TDVWHPPIAL SLGVIVVTLI VAIVWSLRTT
PPAPRSVAEP EGVTKPEGVA EPGGVAEGSQ EVPR
|
|---|
| |