Gene Francci3_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1625 
Symbol 
ID3905904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1952516 
End bp1953205 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content74% 
IMG OID637878963 
Productdephospho-CoA kinase 
Protein accessionYP_480730 
Protein GI86740330 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0237] Dephospho-CoA kinase 
TIGRFAM ID[TIGR00152] dephospho-CoA kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.995866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCACAG TAGGTCTGAC GGGTGGCATT GGTTCGGGCA AGAGCGCGGT GTCAGCGTGC 
CTCGCGGCCC GGGGCGCCTT GCTGATCGAC GCCGACCAGG TCGCCCGGGA CGTGGTGGCG
CCCGGCACCC CGGGGCTCGC CGCGGTCCTG GCGGAGTTCG GCACCGAACT GGCGAACGCG
GACGGCGGCC TGGACCGCGA GGCGCTCGGC CGGATCGTGT TCGCCGATCC CGCCGCCCGC
GGCCGGCTCG AAGCGATCGT CCATCCGCTG ATCCGCGAGG AGACGGCGCG GCGCATGGGG
GAGGTGTCAC CGAGCGGAAT CGCCGTGCAC GACATCCCGC TGCTCGTCGA GGTGCACGCC
GAGGGCACCT ACGACGTGGT GCTGGTCGTC GAGGCGCCGC GGGAGCTGCG GCTGCACCGC
CTCGAGGGCC GCGGCCTGCC CCGCGACCAG GCGCTGGCGC GGATGGCGAA CCAGGCCACG
GACTCCCAGC GCCGGGCCGC TGCCGACATC GTGGTGGACA ACGGCGGGAG CCTGGACGAC
CTCGACGCCC GCATCGAGGA GGTCTGGCAG GACCTGCTGG CCCGCCGCGA CGCCAAGGCC
ACCGCCAAGG CCACCGCCAA GGCCGAGACC GTCGCCAGCG GCACGGATAC TGCCGCCAGC
GGCACGGACA CCGCCGCCCC AGCCGGCTGA
 
Protein sequence
MFTVGLTGGI GSGKSAVSAC LAARGALLID ADQVARDVVA PGTPGLAAVL AEFGTELANA 
DGGLDREALG RIVFADPAAR GRLEAIVHPL IREETARRMG EVSPSGIAVH DIPLLVEVHA
EGTYDVVLVV EAPRELRLHR LEGRGLPRDQ ALARMANQAT DSQRRAAADI VVDNGGSLDD
LDARIEEVWQ DLLARRDAKA TAKATAKAET VASGTDTAAS GTDTAAPAG