Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1614 |
Symbol | |
ID | 3905892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1936953 |
End bp | 1937795 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637878951 |
Product | hypothetical protein |
Protein accession | YP_480719 |
Protein GI | 86740319 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.465813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGGAAA CACGGGACCC GGCGTGGGTA GCGACGACGG GGGACCGGGA GCCGGTGAAC CTGCGGATGG ATCTTCCTCA TACGGCCCGG ATGTATGACT ACTACCTGGG TGGGAAGGAC AACTTCCCGG CCGACCGGGA GGCCGCCGAG CAGGTCATCG CCGCGTTCCC CAACGCCCGC GTCACGGCCC GGGAGAACCG GGCGTTCATG ACGCGGGCGA CCCGGTTTCT GGCCGGGGAG GTCGGGATCC GCCAGTTCCT GGATATCGGT ACCGGCATCC CCACCAGCCC GAACCTGCAC GAGATCGCCC AGGGCCTCGC CCCCGACACC CGGGTGGTTT ACGTCGACAA TGACCCGATC GTGCTCACCC ACGCCCGCGC GTTGCTGACC AGCACCCCGC AGGGGCGCAC CGCCTACCTC GACGCCGACC TGCGCGACCC TGACGGGATC CGCGCTGCCC CGCAGCTGCA CAGCACTCTT GACCTCACTC GGCCGATCGC CCTGTCCGTC GTCGCGATCT TCCATTTCAT CCCCGACGCG GATGATCCCT ACGGGATCGT GCGTCGGCTC CTCGACGCGT TGCCGTCGGG GAGCTATCTT GTCCTCACCC ACGGCACCGG AGATTATGAT CCGGACGCGG AACGGGCGGC GGAAGCCTAC CGGCAGAAGG GGATGTCGGT GCAGCCCCGC AGCCGATCCG AAGTCGAACG TTTCTTCGAC GGGTTGGAGC TGGTCGACCC CGGGGTTCAG GTCGTTCACC GCTGGCGGGC CGACGGCAGC GCCGTCGAGG AGCTGACCGA CGCGCGGGTC AGCATCTACG GCGGCGTTGC CCGCAAGCCG TAG
|
Protein sequence | MTETRDPAWV ATTGDREPVN LRMDLPHTAR MYDYYLGGKD NFPADREAAE QVIAAFPNAR VTARENRAFM TRATRFLAGE VGIRQFLDIG TGIPTSPNLH EIAQGLAPDT RVVYVDNDPI VLTHARALLT STPQGRTAYL DADLRDPDGI RAAPQLHSTL DLTRPIALSV VAIFHFIPDA DDPYGIVRRL LDALPSGSYL VLTHGTGDYD PDAERAAEAY RQKGMSVQPR SRSEVERFFD GLELVDPGVQ VVHRWRADGS AVEELTDARV SIYGGVARKP
|
| |