Gene Francci3_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1606 
Symbol 
ID3903741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1927457 
End bp1927714 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content64% 
IMG OID637878943 
Productphosphopantetheine-binding 
Protein accessionYP_480711 
Protein GI86740311 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.607416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCCAA GCAGGGAAGA GATTGTCACC TGGTGCCAGG AGTATGTCGC GGGTCTCCTC 
GAGATACCCG CGGAGGAGGT CGATCCGGAC GCGGACTTCG ATCGACTGGG AATCGATTCC
GCCCTCGCCG TCTCCCTGCT GATCGAGGTT GAGGAACGCT ACGGCGTCGA CCTACCGCCC
GAGGCGTTGT TCGAGAACCC GAACCTCAAC GCGGTCGCCA CGTACCTGCA CACGCAGCTC
CCGCGGCACG TGGCATAG
 
Protein sequence
MEPSREEIVT WCQEYVAGLL EIPAEEVDPD ADFDRLGIDS ALAVSLLIEV EERYGVDLPP 
EALFENPNLN AVATYLHTQL PRHVA