| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1603 |
|---|
| Symbol | |
|---|
| ID | 3903738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1924445 |
|---|
| End bp | 1925245 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637878940 |
|---|
| Product | thioesterase |
|---|
| Protein accession | YP_480708 |
|---|
| Protein GI | 86740308 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.422548 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGCA CCGGGGTATC GGGCACCGGG GTATCGGGCA CCGGGGTATC GGGCACCGGG
CTGACGGGCA CCGGGCTGAC GGGCCGGACG TGGCTGCGGT ACGAACCGAC GGATGCCGCC
GTGCGGCTCA TCTGCCTCCC GCACGCCGGT GCCGGAGCCA GTTCCTTCGC CAGATGGCTT
GGGCTGTTCC CGTCGACCGT CGCGGCGGTG CGGGTCCAGC TGCCCGGTCG TGAGGACGTG
GTGGCCGAGC CCGCGCTGCG CCTGGTGCAC GATGCCGTCG ACGCGTTGCT ACCACAGGTG
ACCCGGCTGA TCGACCCGCC CGTGGCGTTG TATGGCCACA GCATGGGAGC ACTGGTCGCC
TTCGAGCTGG CCCGCGCGCT GAGTGCGGCG GGTATCCCAC CGGTGCATCT GTTCGTCTCC
GGCCGCCGGG CGCCACACCG GCCCGCCAGC AGGGCACCGA TCCATCACCT GCCGGACGAC
GCGCTCGTTG CCGCGCTGAA GACGATGGGT GACACGGGGG GCTCACATCG GAGTGCGGCC
TTCCTGCGCT ACACGCTACG GCTCACCAGA GTCGATCTGA CGCTCAGCGA GGAGTACGCG
TACCGCTCCG AACCCAGGCT GCGCTGCCCG ATCACGGCCT TCTACGGAAC CGCGGACCCG
GTTGTCGACC TGGCCGAGAT CGAAGCCTGG CGGGACGAGA CGGACGCGGC CTTCGCGGTC
CACACCTTCC CGGGCGATCA CTTCTTCCAT CAACGCCACC GGGTGGCCAT CGCGGCGCGC
ATCGCCGCGG CGTTGGAATG A
|
|---|
| Protein sequence | MTGTGVSGTG VSGTGVSGTG LTGTGLTGRT WLRYEPTDAA VRLICLPHAG AGASSFARWL
GLFPSTVAAV RVQLPGREDV VAEPALRLVH DAVDALLPQV TRLIDPPVAL YGHSMGALVA
FELARALSAA GIPPVHLFVS GRRAPHRPAS RAPIHHLPDD ALVAALKTMG DTGGSHRSAA
FLRYTLRLTR VDLTLSEEYA YRSEPRLRCP ITAFYGTADP VVDLAEIEAW RDETDAAFAV
HTFPGDHFFH QRHRVAIAAR IAAALE
|
|---|
| |