Gene Francci3_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1594 
Symbol 
ID3903729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1913055 
End bp1913780 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content68% 
IMG OID637878931 
Producthypothetical protein 
Protein accessionYP_480699 
Protein GI86740299 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.27452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.426146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACA TAACTGCCTC AGATCGTCGT ACACATGAAA GATCCACAAA TGTGCCCTGG 
TTTGGTTTTC TCGCCGTTGG AGCAGCTTTT GCCCTGTTCG CGCTGGCCAT TCCGCAGTTC
GATCTGACCA CGGTATGGTC GATCGCCGTG CTTCTCGGGA TCGTCCTGCT CCTCGGTGCG
GTGAGTGAGT TGCTGGCGGC GGCGGCGACG GCCCGGGACT GGCGCTGGTC CCATGCGCTG
CTCGCGGTGC TGTTCGTGGC CGGCGGGGTG GTGGCGCTGG TCTGGCCGGA TCCCACGGTC
AAGGCAGTGG GCCGGATCGC GGCCTGGTTC TTTTTGATCA AGGGTCTCTA CGACGTCGTC
AACTCGTTCG TCGCCCGACG GACTGAGCAG CAGGCCGCGG CCGGGCAGTA CGCCACCGCG
GCGGAGGGCC GCCCCACCCC GGCCCAGTGG TGGATGCCGC TGATCGTCGG TGCGTTGGAG
ATCGGGGCGG CGTTCTGGGT GGTGGGTTCC CAGCGGGTCT CGTTGCCGCT GCTGGCCCTG
TGGGTGGGCC TCACGGCCCT GGCGATCGGG CTGACCAAGA TTGCCATGGG GTTCCGGCTG
CGGGGCGTTT CCCGACCGCC CGCCTCGCTG GAGGGCCTGG CGATTCCCGG CTTCGGCGCC
GGCGCGGTGG AAGGCAGGCG GCTGGAGGAG GGGCGCGTCC AACGACCCGT GTCCGGGAAC
CGTTGA
 
Protein sequence
MSDITASDRR THERSTNVPW FGFLAVGAAF ALFALAIPQF DLTTVWSIAV LLGIVLLLGA 
VSELLAAAAT ARDWRWSHAL LAVLFVAGGV VALVWPDPTV KAVGRIAAWF FLIKGLYDVV
NSFVARRTEQ QAAAGQYATA AEGRPTPAQW WMPLIVGALE IGAAFWVVGS QRVSLPLLAL
WVGLTALAIG LTKIAMGFRL RGVSRPPASL EGLAIPGFGA GAVEGRRLEE GRVQRPVSGN
R