Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1579 |
Symbol | |
ID | 3903714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1893617 |
End bp | 1894480 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637878916 |
Product | glycosyl transferase family protein |
Protein accession | YP_480684 |
Protein GI | 86740284 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.21948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.274424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTGGTT CGGGTGATTC GCCATCGGTA AGTGTGGTGA TTCCGGCGCT CAACGAGGCG CGGAATCTGC GGGAAGTATT CGGCCGACTT CCGGTGGACG CCGAAATAAT CCTGGTGGAC GGGAACTCCA CCGATGACAC CGTCCGACTG GCCCGCGAGC TACGCCCCGA CGTGGTCGTC GTCCGCCAGA CCCGATACGG CAAGGGCAAC GCCATGGCCT GCGGCTTTGC CGTGGCATCG GGGGACATCG TGGTCACGCT CGACGCCGAC GGCTCGGCCG ACCCGGCCGA GATACCCTCC TTCGTCGCGG CCCTCGTCCA GGGCGCCGAC TTCGTCAAGG GAACCCGATT CGCCCACCGT GGCGGCAGCA ACGACATTAC CCTGCTGCGT ACTCTTGGAA ATCTCTTCTT CTGTCATCTG GTCAACCTGC TCTTCCACCG CCGGTTCACC GACCTGTGCT ACGGCTACAA CGCATTCCGG CGAGATTGTC TGCCGATGCT CGGGCTGATG CCGGGAGAAA CCGACGGCAT TCGGCGGCAT GGCGACGGCT TCGAGATCGA AACCTTGATC ACCCTCCGTG CGACCAAGGC CTGCCTGCGG GTCACCGAGG TCGGCAGCTT TGAGCACAAG CGCCTTCACG GCGCGAGCAA CCTGAATGCG GGCCGGGATG GTATGCGCGT CCTGCGGACC ATCCTCGTCG AATGGTCGGA AAACCTTACC GCCCGGTCAC GAAACCGCGC CAGGTGGGAC GGCATGCTGC TCAGCAGTCC CGGTCAACCG GTATCGACCA TCGTCAGCCA GCGACGTCCG GGCGACCTTC CCCATGGCCG GCGCAGGACA ACCGGCGCGA CGGAATACGC GTGA
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Protein sequence | MSGSGDSPSV SVVIPALNEA RNLREVFGRL PVDAEIILVD GNSTDDTVRL ARELRPDVVV VRQTRYGKGN AMACGFAVAS GDIVVTLDAD GSADPAEIPS FVAALVQGAD FVKGTRFAHR GGSNDITLLR TLGNLFFCHL VNLLFHRRFT DLCYGYNAFR RDCLPMLGLM PGETDGIRRH GDGFEIETLI TLRATKACLR VTEVGSFEHK RLHGASNLNA GRDGMRVLRT ILVEWSENLT ARSRNRARWD GMLLSSPGQP VSTIVSQRRP GDLPHGRRRT TGATEYA
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