Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1572 |
Symbol | |
ID | 3904804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1886405 |
End bp | 1887364 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637878909 |
Product | parallel beta-helix repeat-containing protein |
Protein accession | YP_480677 |
Protein GI | 86740277 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.163709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCG CTGAGTTGAC CAATCGACGC CGGTATGTCC TGATTGGATC CGTGGCGATG CTTGCGGTGC TGGTGGCGGG CGGTGGGCTG CTGGTCGCCC TTCGCTCGAG AGGCGGGCCC GCGCGGACGG CGGGCGCACC GGCCCCCGCC ACTGTCCCGG CCGGGGTTTC ACCGGATGGC GCTGCCGCGA CCCGCGGCCT ACCAGGGGAC GACCAGGCCG CGGCCCGAGG ATGCGACCGC AAGCCGGACG CCTCGAACAC CGGCCCCGCG CCCGGATCCC GGTTCCAGCC GATGCCCGCC GGGAAACTGG CCACTCCCGG ACAGGTACTG GAGAACAAGG AGTTCTCCGG ACTCATCGAC ATCTACGCCG ACAACGTGAC GATAAGAAAC TCGATCGTCC ACGATGGCAT CCGCGTGCGC GGAAGCCACG TGCTGATCGA TCACGTGGCG ACAAGTGGGA TTGCGATCAG CGGTGGCACC GGTCACGTCA TCCAGTACAG CAATCTTTCC GGTGGCGACG ACGGCTTCCA CATCTCGTCC ACGCTCGAAC CGGTTTCCGG CGTCATCATC CGCCATAACT ACGTCCACGA CCGAAGGCCG CCGAAAGGGG CCCACACCGA CGGCATCCAG GTCCGCGGCG TCCGGAAACT GAGTGTGGTG TGCAACAACA TCGACCTCTC CCCGTACGAC AAGACCCAGA CAGCCGTCGT CTTTCTGGAG TGGGCGAACG GAGGCAACCG TGACGTGGTC GTCGACCACA ATTGGTTGAA CGCCGGCGGA ACGACGCTCG TGGTCGCCGC CAAGAATCTC CGCGTGACGG ACAACCGTTT CGGCCGCGGC TTCCGCTGGA ATGTCTGCCG GCTGGGCAAC GACGATGCCG GTAGGAGCAC TTTCTTCAGT GCCGGGAATG TCTGGGCGGA CAACGGCCGG CCGGTGGTCC TGTGTGGCCA GACCCGATGA
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Protein sequence | MARAELTNRR RYVLIGSVAM LAVLVAGGGL LVALRSRGGP ARTAGAPAPA TVPAGVSPDG AAATRGLPGD DQAAARGCDR KPDASNTGPA PGSRFQPMPA GKLATPGQVL ENKEFSGLID IYADNVTIRN SIVHDGIRVR GSHVLIDHVA TSGIAISGGT GHVIQYSNLS GGDDGFHISS TLEPVSGVII RHNYVHDRRP PKGAHTDGIQ VRGVRKLSVV CNNIDLSPYD KTQTAVVFLE WANGGNRDVV VDHNWLNAGG TTLVVAAKNL RVTDNRFGRG FRWNVCRLGN DDAGRSTFFS AGNVWADNGR PVVLCGQTR
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