Gene Francci3_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1572 
Symbol 
ID3904804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1886405 
End bp1887364 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content66% 
IMG OID637878909 
Productparallel beta-helix repeat-containing protein 
Protein accessionYP_480677 
Protein GI86740277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.163709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCG CTGAGTTGAC CAATCGACGC CGGTATGTCC TGATTGGATC CGTGGCGATG 
CTTGCGGTGC TGGTGGCGGG CGGTGGGCTG CTGGTCGCCC TTCGCTCGAG AGGCGGGCCC
GCGCGGACGG CGGGCGCACC GGCCCCCGCC ACTGTCCCGG CCGGGGTTTC ACCGGATGGC
GCTGCCGCGA CCCGCGGCCT ACCAGGGGAC GACCAGGCCG CGGCCCGAGG ATGCGACCGC
AAGCCGGACG CCTCGAACAC CGGCCCCGCG CCCGGATCCC GGTTCCAGCC GATGCCCGCC
GGGAAACTGG CCACTCCCGG ACAGGTACTG GAGAACAAGG AGTTCTCCGG ACTCATCGAC
ATCTACGCCG ACAACGTGAC GATAAGAAAC TCGATCGTCC ACGATGGCAT CCGCGTGCGC
GGAAGCCACG TGCTGATCGA TCACGTGGCG ACAAGTGGGA TTGCGATCAG CGGTGGCACC
GGTCACGTCA TCCAGTACAG CAATCTTTCC GGTGGCGACG ACGGCTTCCA CATCTCGTCC
ACGCTCGAAC CGGTTTCCGG CGTCATCATC CGCCATAACT ACGTCCACGA CCGAAGGCCG
CCGAAAGGGG CCCACACCGA CGGCATCCAG GTCCGCGGCG TCCGGAAACT GAGTGTGGTG
TGCAACAACA TCGACCTCTC CCCGTACGAC AAGACCCAGA CAGCCGTCGT CTTTCTGGAG
TGGGCGAACG GAGGCAACCG TGACGTGGTC GTCGACCACA ATTGGTTGAA CGCCGGCGGA
ACGACGCTCG TGGTCGCCGC CAAGAATCTC CGCGTGACGG ACAACCGTTT CGGCCGCGGC
TTCCGCTGGA ATGTCTGCCG GCTGGGCAAC GACGATGCCG GTAGGAGCAC TTTCTTCAGT
GCCGGGAATG TCTGGGCGGA CAACGGCCGG CCGGTGGTCC TGTGTGGCCA GACCCGATGA
 
Protein sequence
MARAELTNRR RYVLIGSVAM LAVLVAGGGL LVALRSRGGP ARTAGAPAPA TVPAGVSPDG 
AAATRGLPGD DQAAARGCDR KPDASNTGPA PGSRFQPMPA GKLATPGQVL ENKEFSGLID
IYADNVTIRN SIVHDGIRVR GSHVLIDHVA TSGIAISGGT GHVIQYSNLS GGDDGFHISS
TLEPVSGVII RHNYVHDRRP PKGAHTDGIQ VRGVRKLSVV CNNIDLSPYD KTQTAVVFLE
WANGGNRDVV VDHNWLNAGG TTLVVAAKNL RVTDNRFGRG FRWNVCRLGN DDAGRSTFFS
AGNVWADNGR PVVLCGQTR