Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1571 |
Symbol | |
ID | 3904803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1885120 |
End bp | 1886310 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637878908 |
Product | hypothetical protein |
Protein accession | YP_480676 |
Protein GI | 86740276 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.443604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACG CCCCCACGGC GGATCAGCGG GACGTGGTGC TGGCCCTGCC GATCGAGACG CTCCAGGACA TGGCGATCAG GGCGTACATG CGTCCTCCCG ATCGTCTCCT GCTAACCCTG CTGCGATCGC CCCGGGTCCG GCGCGTGGTG GTGGCCGAGC CGTTCCGGAG CCATCTCGGT ACGGTGCTGC GGGGCGGCCG GAGCACCGTC CTGCCACCGT CCGGTGGCGT TGAGGGGCAT CTGGTGTCGC CGCAGCGGTG GCGCCGCAAG GACCCGGTGA CGCTGCCGTC GCTGCGGGCG GCCTATCGGC GGTATGACAG GAGGCTCGGC CGGGCCGCGG CCCGAGCCGG CTGTAAACGA CCCGTCGTGA TCACCATGTA TCCGCCGCTG GCGGGCTTTG CCGACATGTC CTGGGCCGGC TCGGTCATGT ACTACGCCCG GGACGACTGG GCGACCTACC CACCGCTACG GCGGTGGCAT CCGGCCTTCC GGCATGCCTA CGAGGAGATC CGGCGCCGGC GGCTGCCGGT CATCGCGGTG TCCAGGCCGC TGCTGGAACG CCTCCATCCC ACCGGTGCCG GGCTGGTCGT GCACAACGGT GTCGATCCGG CCGAGTGGCT GCGCCCGCCG TCCCCGCCGG ACTGGCTCCG GCGCCTCCCG CGGCCGTGGT GCGTGTATGC GGGCACCGTC GACACTCGCC TCGATCTGGA CATGATTCGC CGCCTGGCGT CGGCCGGCAC CGTGATTCTG GCCGGCCCCA TCCCGGACGA GGCCTCCGTC CGGTCGCTGC GGTTGCTGCG GTCGGTGCGG TTGCCTGGGC ATCTGCCCCG GCCGGCCGTG ACCGGTCTGA TCGCCGCGGC CGACGTGTGC CTGCTCACCC ACCGGAGCAC TCCGTTGACC GAGGCCATGG ACCCCATCAA GATCTACGAA TATCTGGCGG CCGGGCGTCC CGTCCTCGCC ACGGACCTCG CCCCGGTTCG GGGCATCGGG CGGCGGGTCC GGCTGCTGCG CCCGGGGGAC GATCCGGTGG CGGCGATGAA CGAGGTCCTG ATCTGGCCGG CCGTCACGGA GGCTGACCGG CTGGATTTCG TCGCGGACAA CAGCTGGTCC GCTCGGCACG TCGCCTTCCT GGACTTCGTC CTTGGCCCGG CCGCGCCGGC CGAATCCCGT CTTCTGGCGG TGCAGGCGTA G
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Protein sequence | MKDAPTADQR DVVLALPIET LQDMAIRAYM RPPDRLLLTL LRSPRVRRVV VAEPFRSHLG TVLRGGRSTV LPPSGGVEGH LVSPQRWRRK DPVTLPSLRA AYRRYDRRLG RAAARAGCKR PVVITMYPPL AGFADMSWAG SVMYYARDDW ATYPPLRRWH PAFRHAYEEI RRRRLPVIAV SRPLLERLHP TGAGLVVHNG VDPAEWLRPP SPPDWLRRLP RPWCVYAGTV DTRLDLDMIR RLASAGTVIL AGPIPDEASV RSLRLLRSVR LPGHLPRPAV TGLIAAADVC LLTHRSTPLT EAMDPIKIYE YLAAGRPVLA TDLAPVRGIG RRVRLLRPGD DPVAAMNEVL IWPAVTEADR LDFVADNSWS ARHVAFLDFV LGPAAPAESR LLAVQA
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