| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1568 |
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| Symbol | |
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| ID | 3904800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1881153 |
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| End bp | 1881920 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637878905 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_480673 |
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| Protein GI | 86740273 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.454248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG TGACGGTCTC CAGAACGGCG TTCCGCCGAT GGTATGTCAT GCTTCCGATC
CTGCTCGCCA CGGCGGCCGC AATCGGGATC ACGATGTCTG TCGCCAAGCC CGTCTACCAG
ACGAAGGCCA TGGTCCTCGT GGTCGGCCCG TCGGTGGAGC AGAAGCTCGC CGCATCCTCC
TCCGGTTCCG GGTTTATCCT GCAGCCCGTC AACCCGCTTT CCTACTTCGG CGATTCGCTC
AAGTCGCTGG CTCTCACGGA GTCGAAGATC ATGGACTCTC GCCAGGTACG GGAGGAGATC
CGTTCGGCTG GATTCCATGG TGACTACGAG ATCTCGGTGC AACCGGAGAC GGTATTCCTC
GACATAACGG CCACGGCCGC CGATCCCACC GAGGCCACTC GCACCCTGGA TCAGGTGGTA
CGTGTGATCA CCGCGAAGTC GAACGGCCTG CAGTCTGCTG TGCCGCCGGA CCAGCGTTAC
CGGATAGCGC CGCTGTCCGA GCCGCCGCTG ATGAGCGTGC GACCCGCCCG CAGCCTCAAG
CTGCTTGGCA CCGTCGCGTT CCTCGGCGTA GCGGCGGCGC TGGGGCTGGC GCTTGCCGTC
GACGCCGAGG TCGGGCGCCG GGCCCGGTCA CGGTCACGGG CGGAGCATTA CGGTGCCGCC
CGGGCAGGCG CCAGCCGCGG CCGGGGTCGG CGCGGACGGC ACGCACTGCC CGAAGATTCC
ATGGCGGGCA CTCGACGGGT CGCCTGGCGG TTCGAGGCGA ATCGGTGA
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| Protein sequence | MDIVTVSRTA FRRWYVMLPI LLATAAAIGI TMSVAKPVYQ TKAMVLVVGP SVEQKLAASS
SGSGFILQPV NPLSYFGDSL KSLALTESKI MDSRQVREEI RSAGFHGDYE ISVQPETVFL
DITATAADPT EATRTLDQVV RVITAKSNGL QSAVPPDQRY RIAPLSEPPL MSVRPARSLK
LLGTVAFLGV AAALGLALAV DAEVGRRARS RSRAEHYGAA RAGASRGRGR RGRHALPEDS
MAGTRRVAWR FEANR
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