| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1563 |
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| Symbol | |
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| ID | 3904795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1875466 |
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| End bp | 1876239 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637878900 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_480668 |
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| Protein GI | 86740268 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.436839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCG GTATTCTTGC CGGCGGTCTG GGCAGCCGGT TGGCGGAGGA GACGGTCATC
AAACCCAAAC CGATGATCGA GATCGGCAAC CGGCCGATCA TCTGGCACAT CATGAAGTAC
TACGCTCACT TCCAGTTCAC CGATTTTACG ATCGCCCTGG GGTATAAAGG CGAATATATC
AAACGCTGGC TGGTGGACTA CGCGGCGCTG ACCAGCGATC TCACGGTGTC GCTTCGGCAG
AGCGCTGTGG AGCGGCACGG GGGTACCTCG GAGGATTGGC GGGTAAATCT GGTCGACACC
GGTCAGAATA CCGCCACCGG CGGTCGTATC AGGCGACTCG CGCCCTGGCT CGGTGACGCG
GGGACGTTCA TGTTGACCTG GGGGGACGGC GTAGCGGACA TCGATCTCAA CGCGTTGCGC
GACTTCCACC GCTCGCATGG CAGGATCGCC ACGCTGACCG CCGTGCGGCC ACCCGCCCGG
TTCGGTCACC TCGAGCTGGC CGGGGACCAG ATTGTGGAGT TCTCGGAGAA ACCACAGGCC
GGTGAGGGCT GGATCAACGG TGCCTTCTTC GTCCTGGAAC CGCAGGTCTT CGACTACATT
GCCGGCGACG ACACCCAGTT CGAGAAGGAG CCCCTTGAGA GGCTCGCCAA GGACGGTCAG
CTCATGGCGT ATCGGCATGG CGGCTTCTGG CAGTGCATGG ACACGGTACG CGACCGCAAA
CTCCTGCAGT CACTGTGGGA TGGTGGCTGT GCGCCCTGGA AGGTATGGGA CTGA
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| Protein sequence | MKVGILAGGL GSRLAEETVI KPKPMIEIGN RPIIWHIMKY YAHFQFTDFT IALGYKGEYI
KRWLVDYAAL TSDLTVSLRQ SAVERHGGTS EDWRVNLVDT GQNTATGGRI RRLAPWLGDA
GTFMLTWGDG VADIDLNALR DFHRSHGRIA TLTAVRPPAR FGHLELAGDQ IVEFSEKPQA
GEGWINGAFF VLEPQVFDYI AGDDTQFEKE PLERLAKDGQ LMAYRHGGFW QCMDTVRDRK
LLQSLWDGGC APWKVWD
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