| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1560 |
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| Symbol | |
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| ID | 3904792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1870483 |
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| End bp | 1872249 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878897 |
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| Product | putative signal transduction histidine kinase |
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| Protein accession | YP_480665 |
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| Protein GI | 86740265 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.298915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.578819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCCG AACGGGACCT CGCCTCCGCG GACGAAGGGA CCTCCGATCT GGCCGGCACC
GCGCCGTCTC CGGGACCGCC GGGAGAGCTG ATCTTTCCCG CGGTCGCTCG GCTCGAGCTC
GACGAGCTTC TCGCCCAGCT GGTGGACCGG GCCCAGGACG TTCTGGCCAC TCAAAGCCGG
CTGCACGGCC TGCTGCGGGC CAACCGGATG GTCACCGCCG ACCTCAGTCT CGACGTGGTG
CTACGGCGCA TCGTCGAGTC CGCGTGCGAG CTGGTTGACG CCCGCTACGG CGCGCTCGGG
GTAATCTCCC GCGACGGTCG GCTCGAACAG TTCGTGCACG TCGGGATGGA CCCGGGACTC
GTCGAGACGA TAGGGCGGCT GCCCCGGGGA GACGGCGTGC TGGGCCTGCT CATCGCGGAA
CCGCGGCCGG TGCGCCTCGA CGACATCGCC GACCACCTCC AGGCGGTCGG TTTCCCCCCG
GGCCATCCAC CGATGCGGGC CTTCCTCGGG GTGCCGATCC GGGTCCGCAA CGAGGTCTTC
GGCAATCTCT ACCTCACTGA GAAACGCGGC GGTCGGGTGT TCACCGCGGA GGACGAGGAG
CTGGCGCTCG CGCTGGCCGC GAACGCCGGT GTGGCGATCG ACAACGCCCG GCTGTTCGGG
GAGGCCCAGC ATCGCCAGCA GTGGTCGCAG GCATCCGCCG ACATCACCCG GCATCTGCTC
GCAGACGGCG ACGACCCGCT GGAGCTGATC GTCCAGCGGG CCCGCGACGT CGCCCGCGCG
GACACGACGG CGCTGGCCCT CGGGTCGGAG ACGGCGACCG AGCTGTCCTT CGACGTCGCC
GCCGGGCAGG ACGCGGACCT GCTGCGGGGC CGACGGGTAC CGATAGAGAG CTCGCTGGCC
GGCCGCGCGG TATGCGACCA TGCGCCGCTG GTCGTCGCCG ACGTCCGTGA ACTGGCCGAA
TCCGAGGTCC ACGACCTCGA CATCGGGCCA ACGATGATCG TTCCGCTGAT CACGTCACAT
GTCACGTCCG GGGCGCTGAT CCTCGCCCGG CGCCGGGGCG GTGACCTGTT CACAGACGCG
GACCTGGAGC TGGCGGCCGC GTTCGCCGCG CACGTCGCGC TCGCGCTGGA ACTCGCCCGC
TCCCGGGCCG CACGCGGCCG GCTGTCCCTG CTGGAGGACC GCGACCGGAT CGCCCGCGAC
CTGCACGACC ACGTGATGCA ACGCCTGTTC GCGGTGGCGA TGGGCCTGCA GGGCCTCGCG
GCCAGCGAGG AGCGGCCCAC CCGGGCGGAA CGGATGAACA CCTACGTGGA GGATCTCGAC
GAGACGGTAC GGGAGATCCG CCACACCATC TTCGAGCTGC GGGGCCGGGC GGCACCGGCG
ACGGGCAGCG GCCTGCGGGC GCAGATCCTG GGCGTCATCG ACGACATGAC CGGCGCGTTC
GGCTTCACCC CGCGGGTCCG GCTGGACGGA CCGGTGGACA CGATGATCGG CTCTACCGTC
GGCGACCATC TGATCGCGGT CGTGCGCGAG GCGCTGTCCA ACGCCGCCCG GCATGCCAAG
GCGAGCAGTG TCGAGGTGAC CGTGACCGCC GCGAGCGGCG CCGTCACCGT CGACGTGGTG
GACGACGGGG TCGGCATCGG CCCTACCACC CGCCGCAGCG GGCTGGCGAA CATGCGGGCC
CGGGCGCGGG ATCTCGGCGG GACCTTCGAA CTCGGCCCGG GCCCCGACGG CGGCACCCAG
CTGCGCTGGT CGGTGCCGAC TAGCTGA
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| Protein sequence | MESERDLASA DEGTSDLAGT APSPGPPGEL IFPAVARLEL DELLAQLVDR AQDVLATQSR
LHGLLRANRM VTADLSLDVV LRRIVESACE LVDARYGALG VISRDGRLEQ FVHVGMDPGL
VETIGRLPRG DGVLGLLIAE PRPVRLDDIA DHLQAVGFPP GHPPMRAFLG VPIRVRNEVF
GNLYLTEKRG GRVFTAEDEE LALALAANAG VAIDNARLFG EAQHRQQWSQ ASADITRHLL
ADGDDPLELI VQRARDVARA DTTALALGSE TATELSFDVA AGQDADLLRG RRVPIESSLA
GRAVCDHAPL VVADVRELAE SEVHDLDIGP TMIVPLITSH VTSGALILAR RRGGDLFTDA
DLELAAAFAA HVALALELAR SRAARGRLSL LEDRDRIARD LHDHVMQRLF AVAMGLQGLA
ASEERPTRAE RMNTYVEDLD ETVREIRHTI FELRGRAAPA TGSGLRAQIL GVIDDMTGAF
GFTPRVRLDG PVDTMIGSTV GDHLIAVVRE ALSNAARHAK ASSVEVTVTA ASGAVTVDVV
DDGVGIGPTT RRSGLANMRA RARDLGGTFE LGPGPDGGTQ LRWSVPTS
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