| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1527 |
|---|
| Symbol | |
|---|
| ID | 3904993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1829612 |
|---|
| End bp | 1831285 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637878864 |
|---|
| Product | propionyl-CoA carboxylase |
|---|
| Protein accession | YP_480632 |
|---|
| Protein GI | 86740232 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCAG CACGCGCCGG AACCATCGCG GGTCGGCGGT CCGACGAGGT CCGGCGGTCC
TCGGCCATGC CGGTCCTGAC CAGTCGGGTC GATGCCGCGG GTGAACAGGG ACGGCGCAAT
GCCGAGAGGC ATTGGCACGC TGTGACCGAT CTCCAGGAGC GGTTGGCGGT GGCGGCGGTC
GGCGGGTCGG AGCAGGCGCG GTCCCGCCAC GTGGCTCGCG GCAAACTCCT GCCCCGCGAC
CGGGTCGACA CGCTGCTCGA CCGGGGGAGT CCTTTTCTGG AGCTCTCCCC GCTCGCCGCG
AACGGCTTTT ACGAGGATCC GGTTCCGGGG GCGGGCATCA TCACCGGCAT TGGCCGGATC
TCGGGTCGGG AATGCATGGT AGTCGCCAAC GATGCCACGG TCAAGGGTGG CACCTACTAT
CCGTTGACCG TGAAGAAGCA TCTGCGCGCC CAGGAGGTGG CGCTACAGAA TCGGCTGCCC
TGTGTCTATC TGGTCGACTC TGGGGGAGCG TTTCTTCCGC TGCAGGACCA GGTCTTCCCG
GATCGGGAGC ATTTCGGGCG GATCTTCTTC AACCAGGCCC GGATGTCCTC GCTGGGAATC
TCCCAGATCG CGGCGGTGCT CGGTTCGTGC ACGGCGGGCG GCGCGTACGT TCCCGCGATG
GCCGACGAGG CGGTGATAGT CAGGAATCAG GGGACGATCT TCCTCGGTGG TCCGCCGCTC
GTGAAGGCCG CGACCGGCGA GGTGGTGTCG GCCGAGGATC TCGGCGGCGG GCTGCTGCAC
TCCCGCACCT CCGGGGTGAC CGACCACCTG GCCGAGGACG ACGCCCATGC GCTGCGGATT
GTGCGCTCCA TCGTCGCGGG CCTCGCGCCG CGCGGGCCGC GGCCGTGGGA ACTGGAGCCG
ACCGAGGCAC CGACGGTCGA CCCGGCCGGG CTGTACGCCG CGGTACCGAC GGACGGGCGT
ACCCCCTATG ACGTGCGAGA GGTGATCGCG CGCATCGTTG ACGGCAGCCG TTTCGCGGAG
TTCAAGAAGG AGTACGGAAC GACGCTGGTC ACTGGGACCG CCCGCCTCCA TGGCCATCCC
GTGGGGATCG TCGCGAACAA CGGGGTGCTC TTCGGCGAGT CGGCGCTGAA GGGCACCCAT
TTCATCGAGC TCTGCGATCA GCGCGGTATC CCGTTGGTGT TCCTGCAGAA CATCACCGGT
TTCATGGTGG GTCGGGAGTA CGAGGCCGGC GGCATCGCGA AGCATGGCGC GAAGATGGTT
AACGCGGTTG CCTGTGCCCG GGTGCCGAAG TTCACCGTGG TGATCGGCGG TTCGTTCGGC
GCGGGTAACT ACTCGATGTG CGGCCGGGCA TTCTCGCCCC ACTTTCTGTG GATGTGGCCG
AATGCCTGCG TCTCGGTGAT GGGCGGGGAG CAGGCGGCGG CGGTGCTGGC GACCGTGCGC
CGGGACCAGA TGGAAGCCGC GGGGGTCGCC TGGAGCGAGG CCGACGAGGT CGCCTTCCGG
GCGCCGATCC TGAATCGGTA CGCGGAGCAG GGCAGCCCGT ACTATTCGAC CGCTCGGCTG
TGGGACGACG GTGTCATCGA TCCGGCCGAC ACCCGTATGG TGCTGGGCCT GGGCCTGTCG
GTGGCGGCGA ACGCTCCGCT GGAACCGGTG GGCTACGGCG TCTTCCGGAT GTGA
|
|---|
| Protein sequence | MSAARAGTIA GRRSDEVRRS SAMPVLTSRV DAAGEQGRRN AERHWHAVTD LQERLAVAAV
GGSEQARSRH VARGKLLPRD RVDTLLDRGS PFLELSPLAA NGFYEDPVPG AGIITGIGRI
SGRECMVVAN DATVKGGTYY PLTVKKHLRA QEVALQNRLP CVYLVDSGGA FLPLQDQVFP
DREHFGRIFF NQARMSSLGI SQIAAVLGSC TAGGAYVPAM ADEAVIVRNQ GTIFLGGPPL
VKAATGEVVS AEDLGGGLLH SRTSGVTDHL AEDDAHALRI VRSIVAGLAP RGPRPWELEP
TEAPTVDPAG LYAAVPTDGR TPYDVREVIA RIVDGSRFAE FKKEYGTTLV TGTARLHGHP
VGIVANNGVL FGESALKGTH FIELCDQRGI PLVFLQNITG FMVGREYEAG GIAKHGAKMV
NAVACARVPK FTVVIGGSFG AGNYSMCGRA FSPHFLWMWP NACVSVMGGE QAAAVLATVR
RDQMEAAGVA WSEADEVAFR APILNRYAEQ GSPYYSTARL WDDGVIDPAD TRMVLGLGLS
VAANAPLEPV GYGVFRM
|
|---|
| |