Gene Francci3_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1523 
Symbol 
ID3904989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1823885 
End bp1824727 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content75% 
IMG OID637878860 
Productprecorrin-4 C11-methyltransferase 
Protein accessionYP_480628 
Protein GI86740228 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2875] Precorrin-4 methylase 
TIGRFAM ID[TIGR01465] precorrin-4 C11-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00837984 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTGC ACTTCATCGG GGCCGGACCG GGCGCCGCCG ACCTCATCAC CGTCCGCGGC 
CGGAATCTGA TCGCGTCCTG CCCGGTCTGC CTGTACGCCG GCAGTCTCGT CCCGGTCGAG
CTGCTGGCAC ACTGCCCGCC CGGGGCCCGT CTCGTCGACA CCGCCCGGAT GCCGTTGGAC
GACATCGTCG CGGAGCTGGT CGCGGCCGAC GCCGCCGGTC ACGACGTCGC CCGCCTGCAC
TCCGGCGACC CGTCGCTCTA CAGCGCCGTC GCCGAGCAGA TGCGCCGGCT CGACGCGGCC
GGGATCGCCT ACGACGTGAC GCCGGGTGTC CCCGCCTTCG CCGCGGCGGC GGCGTCGCTG
CGCCGGGAGC TGACGGTTCC CGGCGTCGCC CAGAGCGTGG TGCTGACCCG CACGGCCGTG
CTGTCCAGTC CCATGCCGCC CGGCGAGGAC CTCGCCACCC TCGGCCGGTC GGGGGCGACC
CTCGTGCTGC ACCTGGCCGT GCACCGTATC GAGACGCTCG TCGCCGAGCT CGTGCCGAAC
TACGGTACGG ACTGCCCGGC AGCCGTCGTC GCCTGGGCCA GCCGGGCCGA CGAGATCGTG
TTGCGCGGCA CGCTCGCCGA CATCGCCGGT CGGGCGCGGG CCGCGGGGCT CACCAGGACG
GCCGTGATCA TCGTGGGTCG CGCCCTGGCC GCGGAGGGTT TCCGGGACAG CTACCTGTAC
TCCCGGGAAC GCTTCGGACC GGACGGATGC GTGTCGTCCG TTCCCCCGGC CTCCCCGGTT
TCCCAGGCCT CCCCGGCAAA CGCCGCGCCG TGTGGCCCGG ATCCCGCCCC TCGGGCTCGG
TGA
 
Protein sequence
MTVHFIGAGP GAADLITVRG RNLIASCPVC LYAGSLVPVE LLAHCPPGAR LVDTARMPLD 
DIVAELVAAD AAGHDVARLH SGDPSLYSAV AEQMRRLDAA GIAYDVTPGV PAFAAAAASL
RRELTVPGVA QSVVLTRTAV LSSPMPPGED LATLGRSGAT LVLHLAVHRI ETLVAELVPN
YGTDCPAAVV AWASRADEIV LRGTLADIAG RARAAGLTRT AVIIVGRALA AEGFRDSYLY
SRERFGPDGC VSSVPPASPV SQASPANAAP CGPDPAPRAR