Gene Francci3_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1517 
Symbol 
ID3904983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1813806 
End bp1814783 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID637878854 
Productaldo/keto reductase 
Protein accessionYP_480622 
Protein GI86740222 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.616958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGGG TCGCACTAGG AAGCCAGGGC CTGGAGGTCT CCGTCCAGGG TCTGGGCTGC 
ATGGGAATGT CGGAGTTCTA CGGCGCTGGC GACGACGCCG AGTCGGTCGC CACCATCCAC
CGGGCGCTCG ACCTCGGGGT GACGCTGCTG GACACGGCGG ACATGTACGG CCCGTACCGC
AACGAGGAAC TCGTGGGGCG GGCGATCGCC GGCCGCCGGG ACGAGGTGGT GCTGGCCACC
AAGTTCGGCA TCATCCGTGA CCCCGCCGAC CCGACGGCGC GGGGGATCAA CGGCCGTCCG
GAGTACGTGC GCTCGGCCTG CGACGCATCC CTGCGTCGCC TCGGCGTCGA CCACATCGAC
CTGTACTACC AGCACCGGGT CGACCCGAAG ACGCCGATCG AGGATACCAT CGGCGCGATG
GCCGAGTTGG TCAGCGCCGG CAAGGTGCGC TACCTCGGGC TCTCGGAGGC GGCACCGGCC
ACCATCCGTC GTGCCCACGC CGTCGCCCTG ATCACGGCCC TGCAGACCGA GTACTCGATC
TGGTCCCGCG AGCCGGAGGC CGAGATCCTG CCGACCCTGC GGGAACTCGG CATCGGGTTC
ATCTCCTACA GCCCGCTCGG GCGTGGCTTC CTGACCGGCA CCTTCCGCTC GGCCGCGGAC
TTCGCCGCCG ACGACTTCCG CCAGCACCTG CCGCGGATGC ACGGCGACAA CTTCGACGCC
AACCTCGCCG TGCTCGCCGA GATCGAGAAG CTTGCCGCGG AGAAGAACGT GACCCCCGCG
CAGCTCGCGC TGGCGTGGGT GCACCACCAG GGCGACGACG TCGTGCCGAT CCCCGGCACG
AAGCGGCGCC GCTACCTGGA GTACAACGTC GCAGCCACCA GCATCACGTT GACGGCCGCC
GAGGCGGAGC GGTTGGGTGC GGCGGGGGCG GGCGTGGCGG GCCCCCGCTA TCCCGACATG
TCATCCGTCA ACGGATAG
 
Protein sequence
MRRVALGSQG LEVSVQGLGC MGMSEFYGAG DDAESVATIH RALDLGVTLL DTADMYGPYR 
NEELVGRAIA GRRDEVVLAT KFGIIRDPAD PTARGINGRP EYVRSACDAS LRRLGVDHID
LYYQHRVDPK TPIEDTIGAM AELVSAGKVR YLGLSEAAPA TIRRAHAVAL ITALQTEYSI
WSREPEAEIL PTLRELGIGF ISYSPLGRGF LTGTFRSAAD FAADDFRQHL PRMHGDNFDA
NLAVLAEIEK LAAEKNVTPA QLALAWVHHQ GDDVVPIPGT KRRRYLEYNV AATSITLTAA
EAERLGAAGA GVAGPRYPDM SSVNG