| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1513 |
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| Symbol | |
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| ID | 3904979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1805421 |
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| End bp | 1809401 |
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| Gene Length | 3981 bp |
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| Protein Length | 1326 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878850 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_480618 |
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| Protein GI | 86740218 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGA CTGAACTTTC CGAGCAACCA CCGGAACTTT CCAGGCAACC ACCGGAACCG
GCGGGTCACG ACACGCCGGG CGGGCGCGCC GGCAGGCCGG CGCAGATCAT CACCTTCTAC
TCCTACAAGG GCGGTTCGGG GCGCACGATG GCACTGGCGA ACGTCGCCTG GCTGCTCGCC
GCCTCGGGTA AGCGGGTTCT CACCGTCGAC TGGGATCTGG AGTCTCCCGG CCTGCACCGG
TATTTCCGCC CGTTTCTGCA GAACAGGGAG CTGGACTCGA GTGACGGCGT CACCGAGATG
CTCCAGGGTT TCATCCGGGA GATCGACCGG CTCCAGGACG CGCCGCCGTC GACATCCGCG
GAGCAGGCCT CCGTGCCGGA CGCCGACGCG GTGCGCGAGA TCATCGCCCT GCACGGCGAC
TTCCGGCACA ACATCGAGAC CATCGAGTGG CCCGGGTTCC CGGGCGTCGG ACGGATCGAC
TTCCTCGGTC CCGGCCGGCA GACGTCCACG AGCGCGGTGC TGGTGGCCAC GGTGCCCTGG
TCGACGCTGT TCGAGGACGC CGACGGCCGG GCGTATTTCG CCGCGCTGCG TGAGCGCATG
CGGTTCGCCG ACTACGACTA CGTCCTCATC GACAGCCGGA CCGGCACCTC GGACGCGGCC
GGCGTCTGCA CCCAGCTCCT GCCGGACACC GTCGTCATCG GATTCGCGCT GAACAACCAG
TCCATCGACG GCGGCGCCGG GGTGGCCCGC GAGATCCGTA ACAGCAAGCG GGACATCCGG
GTGCTGCCCG TCCCGATGCG GGTCGAGGAC ACCGAGCAGC GCAAGCAGGA ACTGCGCCGC
CGCGCGGCGT TCCACGCCTT CCGCCCGGTG TTGGCCGACC TGTGCGGTTC CGACCCGGAG
GCACAGCGGA GCTTTCTGAT CGGCCTGGAG ATCCCCTACA AGGCGGTCTA CGCCTACGAG
GAGGTCCTGG CGGCCTTCCA GGAGGATCCC GCCAGCCGGC TCGGCGTCCA GGCCGCCTAC
CGGATGCTCG CCGGAGAGCT TGCCGGCGCC CCGATCGATG CGCGCCCCGT CCCGCCACAG
GATCGGGAGC GGGTGCTGCG GGACTTCGAG CAGTACGGAC CGCCCGCTCC GCGGTCGGTG
GCGATCTTTG GGGCGCCCGA GGACCGGCCC TGGGCGGACT GGCTGGTGTC GGTGCTGGGA
GCCACCGGGG TGCGGATCCG ACCGCTGCCC CCGATGGCGC TGACCCCCGC CGACTTCCCC
GCCGTCGAGT CACTGATCGT GATCGGATCA CCGCATCTGG GCCCGGACAC CCCGGGTGAG
TCCCTGGTGC GCGAGCAGAT CCAGACCCGG ATCCGCCAGC GCGGCTCGCG GGCGGGGGTG
GTGGTCGTCG AGGTGGGTTC GATGCGGCTC GACTCCGCCT ACCATGGAGC CGAGATCATC
TCCCTGCCCG CGCGGAACGA GCGGGACGCG GGGGTCGTGG TCCTCGAAGG GCTGGGGCTG
CCCGTTCCGC GGGCCCGACT CGACGACCTG CGGGTGGTCG CACCCCGGTA CCCGGCCCGC
CGGCCCCGCT TCTGGTCGGT GCCGGCCAGG TTCGCCCAGC CGTTCGTCGG ACGGCACGCG
GTGCTGGACG AGCTGCGCGA CCGGCTGCTG CCGGGGGGCC GACCGAGCGG GCTGTGTCCC
CTGCTCGGCC CGGACGGCGT CGGGAAGAGC GCCATCGCGG CCGAGTACGC GCACCGGTTC
GACTCCGACT ACGACATCGT GCACTGGATC TCGGCGGGTG ACGCCGCCTC GGTCCGGGCG
GGCCTGCGCG ACCTCGCCGA GCGGCTGCGT CCCGGCAGCG ACGTCCCGGA CGCGCAGCGT
TCCCCGAGCG AGCAGCTCGA ACGGGTCGCC CTGGACGCGC TGCGCCAAGG CGACCCCTCG
GCGCGCTGGC TGCTTGTCTA CGACGGCGCC GCCGACCCGC GGACGCTGGC CGGGCTGTTG
CCCGTCCCGA CCGGCAACGG CCATGTCCTG CTGACTTCGG CGGATCCGGC CTGGGACAGT
GAACCCGGCG CGTTGTGGGT GGACCCGTTC ACCCCGGCCG AGAGCCGGGC GTTCCTGCGC
CGGTGGCTGC CCGAGGTCGG TGAGGACCGG CTGGCGACGA TCGCCGAGCG GCTACGGCAT
CAGCCGTCGG GCCTGCGCAC TGCGGTCGGG CGGCTTCGCC AGGACCGGCG GGGAGTGCCG
GTTGACGATC GTGCCGTCGA CGCCTACCTC ACCCAGCTCG CCGGGGTCGC ACCCGAGCAG
GCAACCTGGA CGGTGTCGTT CGAGACCCTG CGCACCAGCG ACCGCGCGAC CCGGCGGGCG
GCGGCCCGGC TGCTGGAACT GTGTGCCTTC CTGGCCCCGC AGGGCGTGCC GCTCGCCCTG
CTGGAATCCC CGGTGATGCT GCGCCATCTC GCCGAGGCGG TGGGGGACGA CGCGATCGCC
GACCCGACCG TGCTGCCCGA GCTGTGGGCG GAGATCCGCA AGCCCCGGCT GGCCGAAGTC
GACACCGTAC CCGACGGTCA GTTCCGCCTC GCCGCGCGCT GGCAGCGGCT CCTCGTCGAA
CGGATGCAGC CCGCCGAGCG GACCGCCGCC CGCGAGGCGG TGCTCGGCAT CTTCGCGGAC
ATCGCCGCGG CCGCTCCGCG GCCCTCGGCC GCCGCGGGCT GGCCGATCTA CCGGATGCTG
GAGGGTCAGA TCCTGGCCTC CGAGGCGATG GAGAGCCCGG CACCCAAGGT TCGGCAGTGG
CTGGTGTCCC AGGTGTATGT GATGTGGCGG TCCGGCCGGC TGGAGTTGGG CCGCGGCATC
GCCGAGGATG CGTTGCGCAG ATGGCGCGAC CTGTTCGGAG CGGACGACCC GCTGACCCTG
CGGATGGCCG CCCACCTGGC CATGGTGCTC CGCGGTCTGG GACGGTTCCA GGAGGCGTAC
GACCTGAACA CCGACACCCT CGCCCGCCAG CGCCGCCACC TGGGCATTTT CCATCGCCAC
ACATTGATCA CCGCGATGAG TTACGGCATC GACATCCGGG AGCTCGGCCG GTACGCCGAG
GCAGCCGCGG AGGAGAGCAG CACCCTGGTC GGTTTCCGCG ACCGGCTCGG CGACAACCAC
CTCGACACCC TCATGGCCGC GAGCAACCTC GCGCTGTCCA CCTTCCTGGA CGGGCGGGCC
CGCGAGGCGC TCCACCTGAG CCTGGACACC ATGGCGCGGC TACGCCTGGC GGGGGCCGAG
GGCACCTCGC AGTTCTGGTG GCTGCAGGCG CGGGCCGGGA TCTGCCATCG GGAGCTGGGC
GAGCTGGAGC AGGCGGAGCG GTTGCTGCGG GAGGCCGCGA CCAACCTCGC CGGCATCGAG
GGGGCGACGA CGCACCTGAC CCTGCGCTGC AACAAGCATC TCGCGGTCGT CCTGCGCCTG
CGGGGCAGCC CGGACGCGGC GAGCCGCCTC GCCGGTGAGA CGCTCGAGCG CTACACCGAG
ATCTACGGGG CGTCCGACCT GGGCACCCTG GCCTGCCTGC TGAGCCGTGC CGGCCATCTG
CACGCGCTGG GCGAGCACCA CCGGGCGTCC GTCGAGGCCG AGTCGTGCCT GCGGGAGTAC
GAACGTCTCC ACGGCCCCGA GCATCCGTTC ACGAACATCT GCCGCTCGGA TCTGTCCATC
TACCTGCGCG CGGACGGGCG GCTGGCGGAG TCCCGCGCAC TGGCCGAGCA GGCCCACCTC
ACGCTGGTCG ACGAGCTCTA CCAGCACCAC CCGTTCGCGC TGGCCGCCGG GGTGAACCAC
GCCGCGAGCC TGGCGGCCCT CGGCGAGACC GAGGCGGCCC GGGCGCTGGA CGAGGATCTG
TTGCGCGAAT CCGAAATGTC ACTGGACAGC AGCCATCCCT ACCTCCCGAT AATGCGGGAG
AACCTGGCGG TCCTCACCGG CAGGCAGGCC GGCGGTGGGC GTGGCCATCG AGAAGTCGAC
ATCGACATCT CCAGCATCTG A
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| Protein sequence | MTMTELSEQP PELSRQPPEP AGHDTPGGRA GRPAQIITFY SYKGGSGRTM ALANVAWLLA
ASGKRVLTVD WDLESPGLHR YFRPFLQNRE LDSSDGVTEM LQGFIREIDR LQDAPPSTSA
EQASVPDADA VREIIALHGD FRHNIETIEW PGFPGVGRID FLGPGRQTST SAVLVATVPW
STLFEDADGR AYFAALRERM RFADYDYVLI DSRTGTSDAA GVCTQLLPDT VVIGFALNNQ
SIDGGAGVAR EIRNSKRDIR VLPVPMRVED TEQRKQELRR RAAFHAFRPV LADLCGSDPE
AQRSFLIGLE IPYKAVYAYE EVLAAFQEDP ASRLGVQAAY RMLAGELAGA PIDARPVPPQ
DRERVLRDFE QYGPPAPRSV AIFGAPEDRP WADWLVSVLG ATGVRIRPLP PMALTPADFP
AVESLIVIGS PHLGPDTPGE SLVREQIQTR IRQRGSRAGV VVVEVGSMRL DSAYHGAEII
SLPARNERDA GVVVLEGLGL PVPRARLDDL RVVAPRYPAR RPRFWSVPAR FAQPFVGRHA
VLDELRDRLL PGGRPSGLCP LLGPDGVGKS AIAAEYAHRF DSDYDIVHWI SAGDAASVRA
GLRDLAERLR PGSDVPDAQR SPSEQLERVA LDALRQGDPS ARWLLVYDGA ADPRTLAGLL
PVPTGNGHVL LTSADPAWDS EPGALWVDPF TPAESRAFLR RWLPEVGEDR LATIAERLRH
QPSGLRTAVG RLRQDRRGVP VDDRAVDAYL TQLAGVAPEQ ATWTVSFETL RTSDRATRRA
AARLLELCAF LAPQGVPLAL LESPVMLRHL AEAVGDDAIA DPTVLPELWA EIRKPRLAEV
DTVPDGQFRL AARWQRLLVE RMQPAERTAA REAVLGIFAD IAAAAPRPSA AAGWPIYRML
EGQILASEAM ESPAPKVRQW LVSQVYVMWR SGRLELGRGI AEDALRRWRD LFGADDPLTL
RMAAHLAMVL RGLGRFQEAY DLNTDTLARQ RRHLGIFHRH TLITAMSYGI DIRELGRYAE
AAAEESSTLV GFRDRLGDNH LDTLMAASNL ALSTFLDGRA REALHLSLDT MARLRLAGAE
GTSQFWWLQA RAGICHRELG ELEQAERLLR EAATNLAGIE GATTHLTLRC NKHLAVVLRL
RGSPDAASRL AGETLERYTE IYGASDLGTL ACLLSRAGHL HALGEHHRAS VEAESCLREY
ERLHGPEHPF TNICRSDLSI YLRADGRLAE SRALAEQAHL TLVDELYQHH PFALAAGVNH
AASLAALGET EAARALDEDL LRESEMSLDS SHPYLPIMRE NLAVLTGRQA GGGRGHREVD
IDISSI
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