| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1511 |
|---|
| Symbol | |
|---|
| ID | 3904977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1802483 |
|---|
| End bp | 1804384 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637878848 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_480616 |
|---|
| Protein GI | 86740216 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCT ACGCCCGGCC CGGTCGTCGG CCCGGCGATG CGCCCCCGGT GTGGCGCAGC
CGCCGGGAGA ACGAGCTGTT CGCCGGTCGC GACGACGAGC TGGAACGCAT CTGGGACGGC
CTGACCCGGC ATCGGCGGGT GGTGCTGGTG CCGGAGGGGG ACCAGTCCGA CATCGGGGAG
ACCGAGCTCG CCGGCGAGTA CCAGCATCGG TTCAAGCTGC GCTACGACGT CTCGTGGTGG
GTGGACTGCT CGACGACCGC CGCCGTCCCC GGGCAGATCG GCGAGCTCTA CGAGCGGGCC
CGCACCGAAC TTCCCGGCCC CCCTCCGGGC GCGGCCGACG CCGGGCCGGA GTCCACCGCG
GGATGGTTGG TCATCTTCGC GGGTGTGGGC AGTCCGGACG AGGTGGCGGA GTTCCTGCCC
GACGGCGAGG CGCATGTGAT CATCATCGCC GACCGCGCCG TGGGCGCCTG GCGGGACCGG
ACGATGCCCA TCGGGCCATT GCGTCGTCGC GAGTCGGTCA TGCTGCTCAC CAGCGCGGCG
CCGATGGTCG ACCCGGCCAC CGCCGCCCAG CTGGGGGAGT TGGTCGGACA CCGGCCCGCC
CTGCTCGCGG AGATCGCCGG GTACCTGATC CGCGAGGCGG TCGTGTCGCC GGAACTGTGT
CGGCGCCTGC TGGAGATGGC GGCGTCGCGG CCGACGCCGG CCGTCCGGGA CGCCGCCGGC
GGTGACCAGT CGTCCCGGGC CCAGGCGATG CGTGGTTCCG GAACCCCCGC CGGGGCCGCG
TCCGGGGCCG CGTCCGGGGC CGCAGCCGGG GCCGGGGCCG CCGTCATGGT CGCAGGCGAG
GTACGTGACC CGGTAGGGCG CAACGCGGCG CGGGCACCAT CGATTCCTGT GATCAACAAG
CACGGCTGGC CCCCCCGGGA GGTCGACGAG CTCGTCGCGG CCCTGATGCG GGTGGAGTAC
ATCGCTGACC TGGCCGGTTT CGACCACTGG TTCGACGAGC TGACACGGAT CCTCGGTCGC
ACGATCGCGC TGACCTCCCC GGTCGTCGCG GTCCGCCTGA CCACGCTGGT CAGCGAGGCG
GTCGGCCAGC CCGATCCCGG CATGCTCGAC GCCTTGCTGC AGGCCCTCGA CCTGGTCGCG
CCGCGCGACG ACCGGTCCGT CGTGGACTTC CGGCGCTTGG TGACCGAGCT GCAATCCCAC
TGGAGCGGCG CGGGCTCGGC GCTGCCCGGC ATGTCATCAC CGGTGCCCGC CTACCAGCTT
CCCTCCTGGC CACCGCTGCT GTCTGGAGTG CCCTCCTCAC CCCCGCCCAG CCACGGGCCG
TCGGGCACCC CGACCTACTA CTTCTTCACC AGCCACGCGC ACCGCGACGA CCGGGATCGC
GTGGCCATCT TCCATCGGGA GCTCGAGCTG GAGCTGCGCC GCAAGGTCCG GCGCCGGATC
CGGCCGACGG GATTCTTCGA CGCCGACCGG CTGGGCGGCG GGGAGCACTG GCCGACCTCG
CTGCGCGACG CGGTGCGCAC GGCTCCGGTG CTGGTCGCGC TGTGGTGTGA CGACTACTTT
GAGAGCGACT GGTGCGGCCG GGAGTTCGGC GTTTTTCAGG AACGTATCCG CCGGGCGACC
AAGCCGGGCG GGAACCCGCC GTCCGGGATC ATTCCCGTGC CCTGGCTGCG GCGGGACGCC
GAGGTACCCG AGGCGGCCCG TGAACTCCAC ATCGCGCATA TGGAGCTTGG TCGTCAGTAT
GACAACCTTC CGGTCCTGGA TTTGATGCGC CATCCCGCCG CCTTCGCGGA GTATGTAAGT
CTGCTGGCCT ACCGGGTCAT GGATGTCGCT CGCGACCAGC TGCCGCCGTT GGACGCCGAG
GTGACGGAGC TCGTCCGTTC CCCGTTCCAC CATCAGCCGT GA
|
|---|
| Protein sequence | MNAYARPGRR PGDAPPVWRS RRENELFAGR DDELERIWDG LTRHRRVVLV PEGDQSDIGE
TELAGEYQHR FKLRYDVSWW VDCSTTAAVP GQIGELYERA RTELPGPPPG AADAGPESTA
GWLVIFAGVG SPDEVAEFLP DGEAHVIIIA DRAVGAWRDR TMPIGPLRRR ESVMLLTSAA
PMVDPATAAQ LGELVGHRPA LLAEIAGYLI REAVVSPELC RRLLEMAASR PTPAVRDAAG
GDQSSRAQAM RGSGTPAGAA SGAASGAAAG AGAAVMVAGE VRDPVGRNAA RAPSIPVINK
HGWPPREVDE LVAALMRVEY IADLAGFDHW FDELTRILGR TIALTSPVVA VRLTTLVSEA
VGQPDPGMLD ALLQALDLVA PRDDRSVVDF RRLVTELQSH WSGAGSALPG MSSPVPAYQL
PSWPPLLSGV PSSPPPSHGP SGTPTYYFFT SHAHRDDRDR VAIFHRELEL ELRRKVRRRI
RPTGFFDADR LGGGEHWPTS LRDAVRTAPV LVALWCDDYF ESDWCGREFG VFQERIRRAT
KPGGNPPSGI IPVPWLRRDA EVPEAARELH IAHMELGRQY DNLPVLDLMR HPAAFAEYVS
LLAYRVMDVA RDQLPPLDAE VTELVRSPFH HQP
|
|---|
| |