Gene Francci3_1497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1497 
Symbol 
ID3904963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1791213 
End bp1791875 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID637878834 
Producthypothetical protein 
Protein accessionYP_480602 
Protein GI86740202 
COG category[S] Function unknown 
COG ID[COG2839] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTCCTG GCGGACGGGG TCGTGGTGCT CGCCCCCGCC GAGTTGCGCA CCGCCTTCGC 
CGAGGTGGGT CGACGCATGG CGGAGAACAA TATGGCGGGG AACAGTGCTG CCGCGGCGGT
GGGGAGCAAC ACTACCGTCG CGGGAGATCG GGAGATGCCG GTGAAGGAGG TCGCGCCATA
AGTACCGGTG GGCTGCTAGT TGTCGCTCTG GTGATGGCCG TCGGCCTGGT CGGCGTCGTC
CTCCCGGTAC TGCCGGGCCT CGTCCTGGTC TGGGGCGCGG GTCTGTGGTG GGTGATCGCG
GACGGTGGGG GAGTCGGTCG CTGGATCGTG CTGGCGCTCA TGACCGCGCT GTTCGTGATC
GGGGCGCTCA CCAAGTACGT CCTGCCGGCT CGGGCTACGG CCGGTCGGGG GGTGCCGTGG
CCCAGCCTGG CCATCGGCGC GGTGTGCGCG ATCATCGGCT TCTTTGTAGT GCCGGTCGTC
GGGCTCCTGA TCGGTGGAGT GGTCGGGATC TACCTGGCCG AGCTGGTGCG GTTGGGGGAT
GCGCGAGCGG CGGGCCGCAC GACCTGGGCC GCGATCGTCG CCTTCGGGGT CGGTGTGGTC
GTGGAGCTCG CCGCCGGCGT CGCGATGGTG CTCGTCTGGT TGGTCGGCGA GTTCGTCGCG
TGA
 
Protein sequence
MCPGGRGRGA RPRRVAHRLR RGGSTHGGEQ YGGEQCCRGG GEQHYRRGRS GDAGEGGRAI 
STGGLLVVAL VMAVGLVGVV LPVLPGLVLV WGAGLWWVIA DGGGVGRWIV LALMTALFVI
GALTKYVLPA RATAGRGVPW PSLAIGAVCA IIGFFVVPVV GLLIGGVVGI YLAELVRLGD
ARAAGRTTWA AIVAFGVGVV VELAAGVAMV LVWLVGEFVA