| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1490 |
|---|
| Symbol | |
|---|
| ID | 3903127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1783358 |
|---|
| End bp | 1784644 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637878827 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_480595 |
|---|
| Protein GI | 86740195 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGACG TGGGCGACCT CGTCGCCCGC GATCGGCGGG TGGTCTGGCA TCCGTATGCT
TCGGTGTCCG GCTCCACGCC GCTCTTCCCG GTCGCATCCG CCGCGGGGAC CCGGCTGACG
TTGACCGACG GCCGGGAATT GATCGACGGG ATGTCGTCGT GGTGGGCGGC GATTCACGGC
TACCGGCATC CCGTGCTCGA CGAGGCGGTG CGCGGGCAGC TCGAGACGAT GTCCCATGTG
ATGTTCGGCG GTCTGACCCA TGAGCCGGCG GTGGCCCTCG CCGAGACCCT CGTGGCGATC
ACGCCGGATC CGTTGCGGCG GGTATTCCCG TGCGATTCGG GTTCCGTCGC CGTCGAGGTC
GCGATCAAGA TGGCGCTGCA GTACTGGACC GGGCGGGGCC GGCCGGGCCG GACGCGCCTG
CTCACCATCC GACGCGGCTA CCACGGCGAC ACCTCGGGCG CGATGGCGGT CTGTGATCCG
GACGCGGGCA TGCATCACCT GTTCAGCCAC CTGCTGCCCC GCCATCTGTT CGCCTCCGCC
CCGGCCTGCG CCTTCGACGA GCCGTGTGAG GACGCTCACG TCGCCGAGAT CGAGGGGCTG
TTGGCCGGGC ACGCCGACGA GATCGCGGCG GTCATCTGCG AGCCGGTTGT GCAGGGCACC
GGAGCCATGC GGTGGTATGC GCCGGGCTGG CTGGCGCGGC TGCGCGAGCT GTGCGACCAC
TACGGGGTGC TGCTGATCGC CGACGAGATC GCGGTCGGGT TCGGCCGCTC GGGCGAGCTG
TTCGGCTGCG ACCATGCCGG CATCAGCCCC GACATCATGT GCGTGGGCAA GGCGATGACC
GGTGGATACC TGTCCATGGC CGCGACGCTG TGCACCGACG AGGTCGCGGC GGGCGTCTGC
GACTCGCCGG CCGGCGTGTT CATGCACGGC CCCACGTTCA TGGGCAACCC CCTGGCGAGC
GCGGTCGCGA ACGCCAGCAT CGACCTGCTC CTCTCCTCGC CCTGGCAGGC TCGGGTGCGC
GAGATCTCCG CCGGGCTCGC CGCCGGGCTC GCCCCGGCCG CCGACCTGCC CGGGGTCGCC
GACGTGCGGG TACTCGGCGC CATCGGAGTG ATCGAGACGC GGGAGCCCGT CGACATGACC
GTGATCCAGC CGCTGTTGGT GGATCTCGGG GTCTGGGTCC GCCCGTTCGG ACGGTTGGTC
TACACGATGC CGCCGTTCAT CATCTCCCCC GCCGACGTGG CCACCCTGGC CGCCGCGATG
GTCGAGGCGG TCGCCCGTAC CATCTGA
|
|---|
| Protein sequence | MADVGDLVAR DRRVVWHPYA SVSGSTPLFP VASAAGTRLT LTDGRELIDG MSSWWAAIHG
YRHPVLDEAV RGQLETMSHV MFGGLTHEPA VALAETLVAI TPDPLRRVFP CDSGSVAVEV
AIKMALQYWT GRGRPGRTRL LTIRRGYHGD TSGAMAVCDP DAGMHHLFSH LLPRHLFASA
PACAFDEPCE DAHVAEIEGL LAGHADEIAA VICEPVVQGT GAMRWYAPGW LARLRELCDH
YGVLLIADEI AVGFGRSGEL FGCDHAGISP DIMCVGKAMT GGYLSMAATL CTDEVAAGVC
DSPAGVFMHG PTFMGNPLAS AVANASIDLL LSSPWQARVR EISAGLAAGL APAADLPGVA
DVRVLGAIGV IETREPVDMT VIQPLLVDLG VWVRPFGRLV YTMPPFIISP ADVATLAAAM
VEAVARTI
|
|---|
| |