| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1489 |
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| Symbol | |
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| ID | 3903126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1781662 |
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| End bp | 1782558 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637878826 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_480594 |
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| Protein GI | 86740194 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.726859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCAGGC GCATCGGGCA GGATGTCAGT GTGGTCATCC CGATTCACGA CATCAATCCC
CTGCGCCGCC GCCCGGTCGT GACCTGGCTG CTCATCGCGG CGAACGTGGT GATCTTCGTT
TTCTTCGAAC CGGTGGTCAG CTCGGTCGCC GGCACGGAGA CGTCGGCGGC ACAGAACATC
TGTGAGCAGC AGCGGTTCTT TCAGGAGTGG GGTGCGATCC CGTGGGAACT GGTGCACAAT
GCGCAGCTCA CCGCCGCGAA CTCCGGCCGG ATCGGGGTGG ATGCGGCCGG CAACCCGGGA
TGCATCGTGG AATCACCGCC CAGCTTCGAC AAGATCCCGG TGCTGTCGGT GCTGACCTCG
ATGTTCCTGC ATGGAAGCTG GCTTCATCTG ATCGGCAACA TGCTGTTCCT CGGGGTCTTC
GGCAACAACA TTGAAGATCG CATGGGCAGG CTGCTCTACC CGCTGTTCTA CCTGGTCTGC
GGATACGCCG CCGGGTACGG CTTCGCCTTG TTGGAGGGTG GGTCGACGAA CACCCTGATC
GGCGCCTCCG GCGCGGTCGC CGGCGTGTTG GGGGCCTATC TGGTGCTCTT CCCACGGGCC
CGCGTCATCG GCCTGGTCTC CGTCCTGTTC TTTCTGCCGT TCTGGCTGCC GGCCTGGATC
GTCCTCGGTT TCTGGTTCGC GTTGCAGTAC ATCTACTTCA CCGGATTCGG CGTCGCCGAC
GGCGGTACCG TGGCGTACGG AGCACATGTA GTCGGCTTCG CGGTCGGCGC GTTGCTCGTC
ACGCCGTTCA TCAGCCGGCT GCGAGCCGCC GGCCCCGGGA CGCCGCTCCG GGTGCCCCAA
CACGGCTGGA TTCGCGGCAC GGGGAACTCG TCGGCCCGCC ACCGCCGCCC CTACTGA
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| Protein sequence | MPRRIGQDVS VVIPIHDINP LRRRPVVTWL LIAANVVIFV FFEPVVSSVA GTETSAAQNI
CEQQRFFQEW GAIPWELVHN AQLTAANSGR IGVDAAGNPG CIVESPPSFD KIPVLSVLTS
MFLHGSWLHL IGNMLFLGVF GNNIEDRMGR LLYPLFYLVC GYAAGYGFAL LEGGSTNTLI
GASGAVAGVL GAYLVLFPRA RVIGLVSVLF FLPFWLPAWI VLGFWFALQY IYFTGFGVAD
GGTVAYGAHV VGFAVGALLV TPFISRLRAA GPGTPLRVPQ HGWIRGTGNS SARHRRPY
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