Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1472 |
Symbol | |
ID | 3903109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1763580 |
End bp | 1764695 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637878810 |
Product | daunorubicin resistance ABC transporter ATP-binding subunit |
Protein accession | YP_480578 |
Protein GI | 86740178 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.487769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.269585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGACA ACCCGACGGT CCTCACCGAG GGCCTGCAGA AGAGCTACGG CGGCAAACGA GCGCTGGTGG GCCTGGACCT GCGGGTCGAT GCCGGCACCG TGCACGGTGT GCTGGGGCCC AACGGAGCCG GCAAGACGAC GGCGGTACGC ATCCTGTCGA CCCTGCTGCG CCCGGACGGC GGCCAGGCCA GGGTCCTCGG TCTGGACGTC GTCCGGCAGG CGGACGCGCT GCGTGCCCGG ATCGGTCTGA CCGGCCAGTA CGCGGCGGTC GACGAGCGGC TCACCGGCCT GGAGAACCTG GAGATGTTCG GGCGGCTCTA CCGTCTGCGC AGCCGCGTCG CGCGGGCCCG CGCGGTCGAG CTGCTCGAGC GGTTCGAGCT CGCCGAGTCG GCCGGTCGGC AGGCGCGTAC CTACTCGGGC GGGATGCGGC GGCGGCTCGA TCTCGCGGCC AGTCTGATCA TCAACCCGGC GGTGCTGTTC CTCGACGAGC CGACCACCGG ACTGGATCCC CGCAGCCGCT CGGCGATGTG GAGGGTGATC GCCGATCTGG TGCGGGACGG CACGACGGTC CTGCTCACGA CGCAGTACCT GGAGGAGGCC GACCGGCTGG CCCACCGGAT CTCGGTGGTC GACGGCGGCC GGGTCATCGC GCGGGGTACC CCGAACGAGC TGAAGTCGCA GGTCGGTGGC GACCGGCTGG ACATCGTCGT CGGTGGTGAC GCCGCCGAGG ATGTCCAGGC CGCCCGGGCG GTGCTCGCCC GGTTCGGATC CGGCGCGGCG ACGGCCGACG GGGAGACGCG TCGGGTCAGT GTGCCGGTAC CGGGCGCGAG CGTGCTGTCC GATGTGGTCC GGGGTCTCGA CGAGCTGGGG GTGCCGATTT CCGACGTCGC CCTGCACCGG CCGTCGCTGG ACGACGTCTT CCTCGCTATG ACCGGGCGCG CTTCGGCCGG CAGCGAGACG CCGCCCGCAC GTGCGGGCGG CGACGGCCGT GGCGACACCG GCAACCCTGA TGACCGGGAC GACCGGGACG ACCGGGACGA CCGGGACGAC CGGGATGACA AGGACGACCG GGATGACAAG GATGACAAGG ATGACAAGGA CATGGTGACC ATATGA
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Protein sequence | MTDNPTVLTE GLQKSYGGKR ALVGLDLRVD AGTVHGVLGP NGAGKTTAVR ILSTLLRPDG GQARVLGLDV VRQADALRAR IGLTGQYAAV DERLTGLENL EMFGRLYRLR SRVARARAVE LLERFELAES AGRQARTYSG GMRRRLDLAA SLIINPAVLF LDEPTTGLDP RSRSAMWRVI ADLVRDGTTV LLTTQYLEEA DRLAHRISVV DGGRVIARGT PNELKSQVGG DRLDIVVGGD AAEDVQAARA VLARFGSGAA TADGETRRVS VPVPGASVLS DVVRGLDELG VPISDVALHR PSLDDVFLAM TGRASAGSET PPARAGGDGR GDTGNPDDRD DRDDRDDRDD RDDKDDRDDK DDKDDKDMVT I
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