Gene Francci3_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1465 
Symbol 
ID3903102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1758382 
End bp1758714 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content68% 
IMG OID637878803 
Producthypothetical protein 
Protein accessionYP_480571 
Protein GI86740171 
COG category[S] Function unknown 
COG ID[COG3856] Uncharacterized conserved protein (small basic protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0699351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG TGGTAGCCCT TGCCCTGGGC GTGACGGCCG GCCTGGTGCT GGGCCCGACC 
GTCCCCGACT GGATGGATCC CTACCTCCCA GTCGCCGTGG TGGCCGCGGT GGACGCTGCT
CTCGGCGGCG CGCGGGCCGT TGCGGAGAGG GTGTTCGACG ACCGGGTGTT CATCGTCTCG
TTCGTCTTCG ACGTCGCGAT CGCCGTCCTG ATGGTGCTGC TCGGCGACCT GATCGGGTTC
GGCGGCGCGT TGTCCACCGC GGTGGTCGTG GTGCTGGGCA TCCGCATCTT CACCACCGCG
ACCGCGTTGC GCCAACATCT GATCAAGGTC TGA
 
Protein sequence
MIAVVALALG VTAGLVLGPT VPDWMDPYLP VAVVAAVDAA LGGARAVAER VFDDRVFIVS 
FVFDVAIAVL MVLLGDLIGF GGALSTAVVV VLGIRIFTTA TALRQHLIKV