| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1462 |
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| Symbol | |
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| ID | 3903099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1754313 |
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| End bp | 1754921 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637878800 |
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| Product | CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase |
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| Protein accession | YP_480568 |
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| Protein GI | 86740168 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
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| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.332491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0171397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATGC CCACCGCCTC GGACCGGATC TGGACGGTTC CGAACGCGCT GTCCGCCCTG
CGGCTGCTCG GCGTGCCGGT CTTCCTCTGG CTGGTGCTGG GTCCGAAGGC GGACGGTGCG
GCGCTCGGCG TTCTCGCGTT CGCCGGAATC AGCGACTACC TGGACGGCAA GCTCGCGCGG
GTGCTGAACC AGACGAGTCG CCTCGGCGTC CTGCTGGATC CCCTCGCCGA CCGGTTCTAC
ATCCTCGCCA CCATCGTCGC TCTGACCCTC CGCGGGATCG TGCCGGTCTG GTTCGCGGTT
CTGCTCCTTG CCCGCGACGT GGCGCTGCTG GCGCTGCCGC CGTTGCTGCG CAGGATCGGG
GTCGGCGTCA CGCTGCCCGT GCACTACCTG GGCAAGGCTG CGACGTTCAA CCTGTTGTAC
GCCTTCCCTC TCCTGCTGCT GTCCGCCGGG GATTCCTGGC TGGCCACCGC GGCACGCCCG
GTCGGATGGG CGTTCGCGAT CTGGGGTACT GCCCTGTACT GGTGGTCTGG TCTTCTGTAC
TTCGTCCAGG CCGGCCAGCT CGTCCGGCGC TTCCGGGCGG ACGCCCGGAC CAGCGCAAGT
GGGAGGTGA
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| Protein sequence | MTMPTASDRI WTVPNALSAL RLLGVPVFLW LVLGPKADGA ALGVLAFAGI SDYLDGKLAR
VLNQTSRLGV LLDPLADRFY ILATIVALTL RGIVPVWFAV LLLARDVALL ALPPLLRRIG
VGVTLPVHYL GKAATFNLLY AFPLLLLSAG DSWLATAARP VGWAFAIWGT ALYWWSGLLY
FVQAGQLVRR FRADARTSAS GR
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