| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1456 |
|---|
| Symbol | |
|---|
| ID | 3903188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1746935 |
|---|
| End bp | 1747741 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637878793 |
|---|
| Product | cytidylate kinase |
|---|
| Protein accession | YP_480562 |
|---|
| Protein GI | 86740162 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0283] Cytidylate kinase |
|---|
| TIGRFAM ID | [TIGR00017] cytidylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00727375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCCCG ACCACGGGTC TGCGCTGTCG GCGGGAAGCA CGGTCACCGA CAGCCGGGAG
GGAACGTCTG CGCCGCTCGG GTCCGAGGGA GATGGTCCCG CGGTCCACGA AGGCGGGGCC
GAGGGTCTGA TCGTGGCGGT CGACGGTCCC GGAGGGTCGG GGAAGAGCAC CGTGGCCCGC
GAGATCGCCC GCCGCCTCGG CCTGCGGTAC CTCGACACTG GGGCGATGTA CCGCGCGGTC
ACCCAGCTCG CGCTGGAACA GCGGATTGAC ATCGAGGACT CGGCGGCGGT CGCGGAGCTG
GCCGAGCGGG CGGTGATCTC GGTCGGTACG GACCCGGACG AGCCCTCGAT CGCCATCGAC
GGTGTCGGGG TGGACGCCCA GATCCGCACC CGCGCGGTGA CCAACGCGGT CAGTGCGATC
GCGGCGGTGC CGGCGGTGCG GGCGTTGCTC GTCACCCAAC AGCGTCAGGT GATCGCCGCC
GCGTTGCCGG CCGGCGGCAT CGTCGTGGAG GGTCGCGACA TCGGCTCGGT CGTGGCGCCG
GGCGCCCAGA TCAAAGTCTT CCTCACCGCC TCGACCGAGG TCCGTGCGCT GCGTCGCTCC
CGCCAGCTCG GGGAGAAGGG CGTCGACGAC GTCGCCCGGA CCCTCGCCGA ACTCGACCGG
CGCGACGCGC TCGACAGCAA CCGGGCGGCG GACCCGCTGG CCATCCCGCC CGACGCGGTG
GTTCTGGACT CGACGGCCCT GTCGGTGTCC GAAGTCGTCG ACGAGGTGCT TCGGCGTTGC
GAGCAGCTGC CGAACCGGAC GAGATGA
|
|---|
| Protein sequence | MKPDHGSALS AGSTVTDSRE GTSAPLGSEG DGPAVHEGGA EGLIVAVDGP GGSGKSTVAR
EIARRLGLRY LDTGAMYRAV TQLALEQRID IEDSAAVAEL AERAVISVGT DPDEPSIAID
GVGVDAQIRT RAVTNAVSAI AAVPAVRALL VTQQRQVIAA ALPAGGIVVE GRDIGSVVAP
GAQIKVFLTA STEVRALRRS RQLGEKGVDD VARTLAELDR RDALDSNRAA DPLAIPPDAV
VLDSTALSVS EVVDEVLRRC EQLPNRTR
|
|---|
| |