Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1448 |
Symbol | |
ID | 3903180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1739408 |
End bp | 1740058 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637878785 |
Product | beta-lactamase-like |
Protein accession | YP_480554 |
Protein GI | 86740154 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.65636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0425697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTCA ATACCGGGCT TCGGGTGGAT CGGGTGATCA CACGCGGCGA CTTCACGCTC GACGGTCAGT CGTTCACGGT CGACAACAAC GTCTGGCTCG TGGGAAACGA CGACGAGGTA CTGGTCATCG ACGCCGCGCA CGACCCGTCG GTGATCGCGG CGGCCATCGG CACCCGCGTG GTCACATCGA TCATTGCTAC ACACGGTCAC AACGACCACA TCAATGCGGC GACGGAGCTC GCGGACCTGG TCCGGGCGCC CATCGCGCTG CACCCCGCCG ACGTGGTGCT GTGGAAGGCG ATCTATCCGC ACCGGGCGCC CGACCACGCG CTCGCGGACG GACAGCTCAT CAGCCTGCCC GAAGGTGGAG CGCTGCGCGT CCTGCACACC CCGGGCCACT CTCCCGGCGG GATCTGCCTG TTCGGGGAGA TCAACGGCGA CCCGGTCCTG TTCAGCGGCG ACACGCTCTT CCGCGGGGGT CCCGGGGCGA CCGGGCGATC CTACTCCGAT TTCCCGACCA TCCTGGCCTC GATCCGTACC AGACTGCTCA CCCTGCCCGC GCACACCGTC GTGCACACCG GTCACGGCGA CGACACGACC ATCGGCGAGG AGGGTATCGA CTACGACGAC TGGGTGAGCC GCGGCCACTG A
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Protein sequence | MIVNTGLRVD RVITRGDFTL DGQSFTVDNN VWLVGNDDEV LVIDAAHDPS VIAAAIGTRV VTSIIATHGH NDHINAATEL ADLVRAPIAL HPADVVLWKA IYPHRAPDHA LADGQLISLP EGGALRVLHT PGHSPGGICL FGEINGDPVL FSGDTLFRGG PGATGRSYSD FPTILASIRT RLLTLPAHTV VHTGHGDDTT IGEEGIDYDD WVSRGH
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