| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1438 |
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| Symbol | |
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| ID | 3903169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1731165 |
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| End bp | 1732301 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637878775 |
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| Product | bifunctional RNase H/acid phosphatase |
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| Protein accession | YP_480544 |
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| Protein GI | 86740144 |
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| COG category | [G] Carbohydrate transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI
[COG0406] Fructose-2,6-bisphosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.246631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0428381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACCG TGCGCAGGCT GGTCATCGAG GCCGACGGCG GGTCGCGGGG TAACCCGGGC
CCGGCGGGCT ACGGGGCCGT GGTCCGCGAC GCCGGCTCGG GGAAGCTGCT GGCCGAGCGC
GCGGACTCGA TCGGGCGCGC CACGAACAAC GTCGCCGAGT ACTCCGGGCT GATCGCCGGG
CTGCGGGCCG CCGCTGAGAT CGCCCCGGAC GCCGAGCTGG AGGTCCGGAT GGACTCCAAG
CTCGTCGTCG AGCAGATGAG CGGCCGGTGG AAGGTCAAGC ATCCGGCGAT GCGGCCGCTG
GTGGCCGAGG CGACGGAACT CGCCGCCCGG TTCCCCGCGG TCCGTTTCCA GTGGGTGCCC
CGCGCGCGCA ACGCCGACGC CGATCGGCTC GCGAACGAGG CGATGGACGC CGCCGCCGCC
GGGCGGGCCT GGGAACCCGC GGTCCCGCAG TCCCCGGACC CGGTCCCGCA CCACGCGCCG
ACGACGAACC GGCTCTCCGG CTGGATGGCG CCGCCCGCAC CGCCGACGAC GACCGTGCTG
CTGCGTCACG GGCAGACCCC GCTCTCGGTG GAGAAGCGCT TCAGCGGGAC GGTCGAGGCG
GCCCTGACCG ACGTCGGGCT CGGCCAGGCC GCGGCCGTAG CGAACCGGCT GCGCGACGAG
CCGTTCGATC TCGTCGTCAG TTCGCCGCTG AAGCGGGCCC GGCAGACCGC CGAGGCCCTC
GGCCGCGACT ACGTCGTCGT CGACGATTTG CGGGAGACCG ACTTCGGCGC CTGGGAGGGG
CTGACCTTCG CCGAGGTGCG TGAGAAGTTC CCCGATGAGC TCAATGCCTG GCTCGCCGAC
CCGCACGTCC CGCCGCCCGG CGGGGAGAGC CTGATCGCCA CCGTGGCCCG GGTAGCGCGG
GTGCGTGACC GGCTGCTCGC CGAGCAGCCA GGCGGGCGGG TCCTCATCGT CTCACACGTC
ACGCCGATCA AGGGGTTGGC CCAGCTGGCG CTGGCGGCGG AACCGGCCGT GCTCTACCGC
CTCCACCTGG ATCTGGTGTC GATGACGACC ATCGACTGGT ACTCCGACGG CCCGGCGGTG
CTACGCGGGT TCAACGACAC CCATCACCTG GCGGGCCAGA CGATCTACGG CGAATAG
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| Protein sequence | MGTVRRLVIE ADGGSRGNPG PAGYGAVVRD AGSGKLLAER ADSIGRATNN VAEYSGLIAG
LRAAAEIAPD AELEVRMDSK LVVEQMSGRW KVKHPAMRPL VAEATELAAR FPAVRFQWVP
RARNADADRL ANEAMDAAAA GRAWEPAVPQ SPDPVPHHAP TTNRLSGWMA PPAPPTTTVL
LRHGQTPLSV EKRFSGTVEA ALTDVGLGQA AAVANRLRDE PFDLVVSSPL KRARQTAEAL
GRDYVVVDDL RETDFGAWEG LTFAEVREKF PDELNAWLAD PHVPPPGGES LIATVARVAR
VRDRLLAEQP GGRVLIVSHV TPIKGLAQLA LAAEPAVLYR LHLDLVSMTT IDWYSDGPAV
LRGFNDTHHL AGQTIYGE
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