| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1425 |
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| Symbol | |
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| ID | 3903156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1718525 |
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| End bp | 1719130 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878762 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_480531 |
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| Protein GI | 86740131 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.646743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0381743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACGA AGCCCTCGGC CCCGCCCGGG GGGTCGACGC CGGTGCCGCA CGGGCGGGAC
GAGGCTCGCC CTACCGCCGG TTCCCGCCGG GCGGTGGCCA CGCTGACGGT CGCGGCGGCG
ATCGTCCTGC TGTCGGACAT CCTCACCAAG CATGTCGCGG TGGCCACCCT GTCTGACCGG
GGGCCTGTCG AGGTCATCCC CGGCCTGCTC GACCTGGAGC TCACCCGCAA CTCCGGAGCG
GCCTTCAGCC TCGCGGGCGG CGCGACGGTG CTACTCAGCC TGGTCGCCCT GGCCGTGGTC
GCGGTGGTGG TGTTCACCGC CCGCCGGCTG CGGTCGGTGG GGTGGGCTCT CGTGCTCGGC
GCCCTGCTCG GCGGGGCGGT GGGCAACCTC GCCGACCGCC TCTTCCGCGC GCCCGGTCCC
CTGCGCGGTC ACGTCGTGGA CTTCGTCCAC CTCCACTACT GGCCCATCTT CAACGTGGCC
GACTCCGCGA TCGTCTGCGG CGGCGTGCTC GCGGTCATCC TGTCCCTGCG CGGCGTGGGT
CTGGACGGCA CGCGCTACGC CGAGCATCAT CCCCCCGGCG GGGGCAGTGA CCATCACGGG
CGGTGA
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| Protein sequence | MSTKPSAPPG GSTPVPHGRD EARPTAGSRR AVATLTVAAA IVLLSDILTK HVAVATLSDR
GPVEVIPGLL DLELTRNSGA AFSLAGGATV LLSLVALAVV AVVVFTARRL RSVGWALVLG
ALLGGAVGNL ADRLFRAPGP LRGHVVDFVH LHYWPIFNVA DSAIVCGGVL AVILSLRGVG
LDGTRYAEHH PPGGGSDHHG R
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