Gene Francci3_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1416 
Symbol 
ID3903397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1706581 
End bp1707030 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content70% 
IMG OID637878753 
Producthypothetical protein 
Protein accessionYP_480522 
Protein GI86740122 
COG category 
COG ID 
TIGRFAM ID[TIGR00026] deazaflavin-dependent nitroreductase family protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.61227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.064122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA CGCAGGACCC GCGCAGACCT GGCTTCGACG TCAGGGCGGT CAATCAGACC 
GTGATCGCCG AGTACCGGGC GACTGGCGGC GTGTTGGAGA AGACGCTGCC CGGTTCCAGG
CTGGTGCTCG TGACGACGAC CGGGCGGCGC AGCGGGAAGG AGCACACCAC CCCGCTGGGG
TACGTCATGG ACGGCGGTCC CGGCCGCATC GTCGTCTTCG CGTCCAACAT GGCCGCCCCA
CGGCATCCGG ACTGGTACCA GAACCTGACG GCCGAGCCGA AGGTCGTGGT GGAGCTCGGC
ACCGACCGGT TCGAGGCCGA GGCGTTGACC GCCACCGGGG ACGAGCGGCA GCGGCTCTAC
GAGGCACTGG TCGAGACGAT GCCGGGGATC CGCGGCCACC AGGAGCAGGT GGAACGGGAG
ATCCCGGTGG TCGTGCTGGT CACGCTGTGA
 
Protein sequence
MADTQDPRRP GFDVRAVNQT VIAEYRATGG VLEKTLPGSR LVLVTTTGRR SGKEHTTPLG 
YVMDGGPGRI VVFASNMAAP RHPDWYQNLT AEPKVVVELG TDRFEAEALT ATGDERQRLY
EALVETMPGI RGHQEQVERE IPVVVLVTL