| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1413 |
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| Symbol | murD |
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| ID | 3903394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1702379 |
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| End bp | 1703794 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637878750 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_480519 |
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| Protein GI | 86740119 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0329429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0755004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCG ACGGTCAGGG CCCGGGCGAC GGTCAGGGCC CAGGCAACCT CACGACCTCG
ATCTCCTGGG CGGGCCTGCC CGTGCTGGTC GTCGGGATCG GGGTCTCCGG GCTCGCCGCG
GCCCGGGCGC TGCTTGCCCG CGGTGCGCGG GTCCGGGTCG TCGACGCCGG CGACTCCCCA
CGTCACCAGG GTGCGGCCGC GACGCTGCGG GCGCTCGGGG CCGAGGTGAA CCTCGGCGGC
CTGCCGGCCG GCCCCGGGGA CAGCGCCCTC GTCGTCACCT CGCCCGGCGT CCCGCCGACG
GCCCCGCTGA TCACCGGGGC GGCCGGCGCC GGGATCCCGG TCTGGGGGGA GGTGGAGCTC
GCCTGGCGGT GGCGGGGTGG GAGCCGGTGG CTCGCCGTCA CGGGAACGAA CGGCAAGACG
ACGACCACCG AGATGCTCGG CGCGATGCTC GCCGCCGGTG GCCGGCGATC CACCACCGCC
GGGAACATCG GGACCCCGAT CGTGGACGCG GTTGCCGCCG AGCCGCCCTA CGAGACCCTC
GCGGTGGAAC TGTCCAGCTT CCAGCTCCAT TACACCCACA CCATGGCCCC CCTCGCCGCG
GCCGTGCTCA ACGTCGCCCC CGACCATCTC GACTGGCACG GGGGCGCGGC GGCCTATGCG
GCAGCGAAGG CGGGGATCTG GCGTCGTCCC GGGACGACCG CGATCGGCAA CGCCGACGAC
GCAACCAGCG CGGACCTGCT CGCCGCCGCT CCGGGGCGGC GGGTCCTGTT CGGTCTCGAC
CCGGCGGCCC GGCCGCGGCC CGGCCTGACC GTCGTCGACG GCCACCTCGT CGACGACGCC
TTCGGTGGCG GGCGGCTGGT CGCCGTCCGT GACCTCGTGC TGACAAGTCC GCACATGATC
TCCAATGCGC TGGCCGCCGC CGCGCTTGCC CGCGCCGAGG GCGTTGGCCC GGCCGCGATC
GGCGCGGCGC TCGTCGCTTT CCGGCCCGGC GCCCACCGCA ACGCCGAGGT GGCCGTCATC
GACGGGGTCC GCTGGGTGGA TGACAGCAAG GCGACGAACC CACACGCCGC CGCCGCGTCG
CTGGCCGGCT ACCCCTCGGT GGTGTGGATC GCGGGCGGCC TCAACAAGGG CCTCGCCTTC
GACGATCTCG TCCGCGACGC GCGCCGGGTG CTGCGCGCCG CGGTCCTCAT CGGGCGCTGC
GCCGATGAGA TCGCCGCCGC TCTCGCCCGA CACGCCCCCG ATGTCCCCGT GGAACGGGCT
GACGGCATGG ACGATGCGGT GAAGGCTGCG GCGGCGTTCG CGACCACCGG TGACACTGTG
CTCTTGGCGC CGGCCGCGGC CTCGATGGAC ATGTTCCGGG ACTACGCGGC GCGCGGAGAT
CTGTTCGCGG CGGCGGTCCG CGCACGAGAG GGGTAA
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| Protein sequence | MTGDGQGPGD GQGPGNLTTS ISWAGLPVLV VGIGVSGLAA ARALLARGAR VRVVDAGDSP
RHQGAAATLR ALGAEVNLGG LPAGPGDSAL VVTSPGVPPT APLITGAAGA GIPVWGEVEL
AWRWRGGSRW LAVTGTNGKT TTTEMLGAML AAGGRRSTTA GNIGTPIVDA VAAEPPYETL
AVELSSFQLH YTHTMAPLAA AVLNVAPDHL DWHGGAAAYA AAKAGIWRRP GTTAIGNADD
ATSADLLAAA PGRRVLFGLD PAARPRPGLT VVDGHLVDDA FGGGRLVAVR DLVLTSPHMI
SNALAAAALA RAEGVGPAAI GAALVAFRPG AHRNAEVAVI DGVRWVDDSK ATNPHAAAAS
LAGYPSVVWI AGGLNKGLAF DDLVRDARRV LRAAVLIGRC ADEIAAALAR HAPDVPVERA
DGMDDAVKAA AAFATTGDTV LLAPAAASMD MFRDYAARGD LFAAAVRARE G
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