| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1411 |
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| Symbol | |
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| ID | 3903392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1699854 |
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| End bp | 1701257 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637878748 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_480517 |
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| Protein GI | 86740117 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0779363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0360217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGC TGACCCTGGC CGAGGTCGCG TCGGCGACCG GCGGCCGGCT CGACGCGGTG
CCCGACCCGG GCGTCACGGT GCGTTCGGTC GTCGTCGACT CCCGCGAGGT CCGCGACGGC
GCCTTGTTCG TCGCCCTGGC TGGCAGCCGG GTCGACGGGC ACGACTTCGC CGCCGCCGCC
GTCGCCGCCG GCGCGTCCGC CGTGCTCGCC GCCCGGTCGG TGGGCGAGCC GGCCGTCATC
GTTCCCGATC CGCCTTCGGC GCTCGCCGCG CTCGCCGCGT ACGTCCGTGA TCTGGCCGCC
GCCACCGTGG TCGCCGTGAC CGGGTCGGCG GGCAAGACGA CGACCAAGGA CCTGCTCGCC
GACGTGCTGG GCGGGCTCGC CCCGACGGTG GCCGCGCCCG GCTCCTTCAA CAACGAGATC
GGACTGCCGC TGACGCTGCT GCGCACCGAG CCGGACACGG CGTTCGTCGT CCTGGAGATG
GGTGCCCGCG GTCCGGGGCA CATCGCCACC CTCTGCGCGG TAGCCCGCCC GGCTGTGGGG
GTGGTCCTCA ACGTCGGCAG TGCCCACCTG GGCGAGTACG CCGACGGCCG GCTGGGGATC
GCCGCGGCTA AGGGCGAGCT TGCCGAGGCC GCGAGCGAGG CCGTCGTGCT CAACGCCGAT
GACCCGCTGG TCGCGGCGAT GGCGGTTCGG ACGACGGCCG AAGTGATCAC TTTCGGGGAG
GGTGGACGGG CCGACGTGCG GGCCGGTGCC GTCGATGTCG ACCGGCTGGG CCGCGCCTCG
TTCGACCTGC TGGCGCACGG CGAGCACCAT CGGGTGACCC TCGGGCTCGT CGGCGCGCAC
CAGGTGCCGA ACGCGTTGGC CGCGGCGGCC GTCGCGATCC GGCTGGGGCT GTCCCCGGAC
CGGGTCGCCG CGGCGCTGTC CGCCGCCCGC CCGCGCAGCC GGTGGCGGAT GGAGGTGACC
TCCACCGCGG CCGGGGTGGT GGTCGTCAAC GACGCCTACA ACGCGAACCC GGAGTCGATG
CGGGCGGCGC TGAAGGCGTT GGTGGACATG CGGGGGAAGG GCCGGGCGTT CGCGGTGCTC
GGTCCGATGG GGGAACTCGG TGACGCCGCC GCCGCCGAGC ACGACGTGCT CGGCCGGTTC
GCGGTCCGCC TCGGGGTCGA TCGACTGATC GCGGTGGGTC CGGCGGCCCG CCATATCCAC
CTGGGCGCCT CGCTGGAAGG CTCCTGGGAC GGGGAGTCGG TGGAGGTGAC CGACGCCGAG
GAGGCGGTGG CCCTGGTGGC CGCGCAGGCC GGACCGGACG ACGTGGTACT GGTCAAGGCC
AGCCGGTCCT TCGGTCTGGA GCGCGTCGCC GAGGCGTTGG TGACCAGATT CGGCGTCCTC
GGCGCCGGGA TCGAGGGGAC ATGA
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| Protein sequence | MIPLTLAEVA SATGGRLDAV PDPGVTVRSV VVDSREVRDG ALFVALAGSR VDGHDFAAAA
VAAGASAVLA ARSVGEPAVI VPDPPSALAA LAAYVRDLAA ATVVAVTGSA GKTTTKDLLA
DVLGGLAPTV AAPGSFNNEI GLPLTLLRTE PDTAFVVLEM GARGPGHIAT LCAVARPAVG
VVLNVGSAHL GEYADGRLGI AAAKGELAEA ASEAVVLNAD DPLVAAMAVR TTAEVITFGE
GGRADVRAGA VDVDRLGRAS FDLLAHGEHH RVTLGLVGAH QVPNALAAAA VAIRLGLSPD
RVAAALSAAR PRSRWRMEVT STAAGVVVVN DAYNANPESM RAALKALVDM RGKGRAFAVL
GPMGELGDAA AAEHDVLGRF AVRLGVDRLI AVGPAARHIH LGASLEGSWD GESVEVTDAE
EAVALVAAQA GPDDVVLVKA SRSFGLERVA EALVTRFGVL GAGIEGT
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