| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1409 |
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| Symbol | |
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| ID | 3903390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1696137 |
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| End bp | 1698149 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878746 |
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| Product | peptidoglycan glycosyltransferase |
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| Protein accession | YP_480515 |
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| Protein GI | 86740115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00741927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.017677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTCGA CGCCCCCGGG CTCCCCTCAG CGCGGCCGCG GACGGCTACG CCTTGTTCCT
CCACCGCCAC CTTCAGTGTA TGGCGGTCGG TTGCGGAGGG ATGTCGACGA CCCGGGTCGG
GCGGTCGGCG ACGGGCCCGG TGCGGACGAG TACGGCGACG AGGAGCACGA CGGCCGGTAT
CCGGGCGGCC GGTATGTGGG CCGGCCAGGC TCGGTGCCCT GGCGTCCCGG TCGGGTCAGC
CGGCCGCGGC ACCCCCCGGC TCGTCGCGCC TACCGGCTGG GCAGCCCGCG TCGGCGGCTG
CGGGTGTCCA TCGTGCTCAT GTGCGCGGTC CTCAGTGTCC TCGGGCTGCG CCTGACCCAG
CTGCAGGGTT TCTCCGCCTC CACCTACGCG GCCCAGGCCG AGGCCCAGCG GCTGCGGACC
ATCGTGCTGC CCGCGGCGCG TGGCGCCATC ACCGACCGGG CGGGCCACAC GCTCGCGCAG
TATGTCGAGC TGCGGGCCGT CTACGCGAAC CCGACGAACG TCAGGGACAT CGCGGGGACG
GCCGCGAAGC TCGCGCCGGT CCTCGACGAC AGCACCGAGG CGTTGCGCAG ACGGCTTACC
ACCGACCCGG CCGAGCACAT CAAGTTCGTC TACCTCGCCC GCGGGCTCAC TCCGGACGTG
GCGGAGAAGG TCAGCGCCCT GGGGCTGCGC GGTATCGGCA TCACCGAGGA ACGCGGACGC
ACCTACCCGT CCCGGGAACT GGCCGCGAAC GTCATCGGGT TCATGCGGCA CGGCGATGGT
GACATCCTCG AGGGCGGCGG CGGGCTGGAG CTGGCGTATG ACGAGGTGCT GCGCGGTACC
GACGGCCTTC GCCGACTGGA GGCGAACCCG GCGGGCATCG AGATCCCCTC GGGCCAGAGC
CGCGAGAAGG ACCCGATCCC GGGTTCTTCG CTGCGCCTGA CCCTCGAGCG GGACATCCAG
TGGAACGCCC AGAACGCGAT CGCCGACGCG GTCCGTACCT CCGAGGCCGA CGGCGGCACG
GCCGTCGTGA TGGACCCCCG CACCGGGGAC ATCCTCGCGA TGGCCGACGC GCCGCAGTTC
GACCCGAACA ACATCACCGC CCGGGACACC CCGGCGCTGG GCAATCGGTC CACGCGGGAC
GCCTACGAGC CCGGCAGCGT CAACAAAGTG ATCACGATGG CCGCGGCGCT GGACCGCGGT
CTGATCACCT CCGAGACCCC GATGACCATC CCGCCGTTCA TCACCCGGGG TGGGGTACGC
ATCGAGGACT CCGAGCCGCA CGGCGTCGAA CATCTCACCG CCGCCGGCGT CCTGGCCCGC
TCCAGCAACA TCGGCACCGT GGAGATCTCC GAGCGGGTCG GGCGGATCGG GCTGGAGCAG
GCGCTGCGCT CGTTCGGGCT CGGTGCCCGC ACGGGTCTGA ACTTCCCCGG CGAGGGCGCC
GGCCTGCTGC CGGCAGCCCG GGACTGGTCG GGCAGCCAGG CCGCCACCAT TTCCTACGGG
CAGGGCATGT CGGCGACGGC GCTCCAGATG GCCTCGGTGT ACGCGACTAT CGCGAACGGC
GGTGTTCGCG TGACCCCGCG GCTTGTCGAC GCCATCACCG GTCCGGACGG CGTCGTCAAG
GTGACTCCCC AACCGCCTGG TCAGCGCGTC GTCAGCGCGC AGACCGCGGC CACGCTCACC
CGGATGCTCG AGGCGGTGGC GACGAACGAG GGCACGGCGC CGCTTGCCGA GGTTCCCGGT
TACCGGGTGG CCGGCAAGAC GGGCACCGCC AAACGGCCCG ACCCGGTGCA CGGCGGTTAC
CAGGGCTACG TTCCCTCGTT CATCGGGTTC GCCCCGGCGG ATGATCCGCG GGTGGTGGTG
GAGATCGTCC TGGACAACCC GAAGAAGGGT TACTTCGGCG GTCAGGTCGC CGCGCCCGTG
TTCCAACGTG TCATGTCCTT CGCGTTGACC ACCCTCGGCG TGCCACAGCC GATCACCAGG
CCCGCACCGC TCCTGCTCGA CCTGGACAGA TGA
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| Protein sequence | MSSTPPGSPQ RGRGRLRLVP PPPPSVYGGR LRRDVDDPGR AVGDGPGADE YGDEEHDGRY
PGGRYVGRPG SVPWRPGRVS RPRHPPARRA YRLGSPRRRL RVSIVLMCAV LSVLGLRLTQ
LQGFSASTYA AQAEAQRLRT IVLPAARGAI TDRAGHTLAQ YVELRAVYAN PTNVRDIAGT
AAKLAPVLDD STEALRRRLT TDPAEHIKFV YLARGLTPDV AEKVSALGLR GIGITEERGR
TYPSRELAAN VIGFMRHGDG DILEGGGGLE LAYDEVLRGT DGLRRLEANP AGIEIPSGQS
REKDPIPGSS LRLTLERDIQ WNAQNAIADA VRTSEADGGT AVVMDPRTGD ILAMADAPQF
DPNNITARDT PALGNRSTRD AYEPGSVNKV ITMAAALDRG LITSETPMTI PPFITRGGVR
IEDSEPHGVE HLTAAGVLAR SSNIGTVEIS ERVGRIGLEQ ALRSFGLGAR TGLNFPGEGA
GLLPAARDWS GSQAATISYG QGMSATALQM ASVYATIANG GVRVTPRLVD AITGPDGVVK
VTPQPPGQRV VSAQTAATLT RMLEAVATNE GTAPLAEVPG YRVAGKTGTA KRPDPVHGGY
QGYVPSFIGF APADDPRVVV EIVLDNPKKG YFGGQVAAPV FQRVMSFALT TLGVPQPITR
PAPLLLDLDR
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