Gene Francci3_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1399 
Symbol 
ID3903380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand+ 
Start bp1685095 
End bp1685832 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content72% 
IMG OID637878736 
Producthypothetical protein 
Protein accessionYP_480505 
Protein GI86740105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.692098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.000102515 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCGATCA CGGTGCCCAG GAGCCTGGCG AGGCGGCCCG CGTCGGCGGC GGGCCCGGCG 
GTGACCCCGG CGGTGACCCC GGCGGTGACC CGGACCCGGA CACCGCGGAC GACGGCCGGG 
GCGGACCTTC TCCCGCGGCG GGCCGGCGGA CTGCCGCACG AGCTGATCTT CCGGATCGAG 
TCGGTATCCC GGCACGCCTC GGTCCGGCAC GTGCACGTCG AGACCGACGA GGGCGCGGTG 
CTGGCCGACT GGTGGTCGCG GGGCCGGGTC GAGCTGATGG CGGCCGGCCG GCCGTTCGTG 
CTGGAGACCG ACCTCGACGG TTTCGGGATC CGTCTGGTCG AACCCATGGG ACGGGTGCCC 
CTGGCCGCCT TCGAGCCAGG CCGCCACGGG GGCTGGGTGC GCCTGTCGGA CGGTGCCACG 
CTGCGTTGGC TCAGGCCGAC CCGCGGCGAG TTCGCCAGCG GGCTCGTGGG TCACCGTGAT 
GTGAACATCA TCCGGTTTGC GCTGGACGGA ACGGCGCTTG TCGTGGCCGA TCCGGATGCG 
CTCGACCCGA GGGTCACCCG GGTGGCCCGG ACGACAGGTG CGGATTCGGG ACATGTCTGT 
CGGGGGAAAG TCGCGGACCC GCGGCTGGGA TGGGTTCCCG ACGTGGTGGC CCTGCTCGTC 
CTCGGCTGGT TTCTTCGGGT GGTCGAGTCC GAGGTCGCCG GATCTGCTCG ATCGCGTGTT 
CGATACCTCG ATGCTTGA
 
Protein sequence
MAITVPRSLA RRPASAAGPA VTPAVTPAVT RTRTPRTTAG ADLLPRRAGG LPHELIFRIE 
SVSRHASVRH VHVETDEGAV LADWWSRGRV ELMAAGRPFV LETDLDGFGI RLVEPMGRVP 
LAAFEPGRHG GWVRLSDGAT LRWLRPTRGE FASGLVGHRD VNIIRFALDG TALVVADPDA 
LDPRVTRVAR TTGADSGHVC RGKVADPRLG WVPDVVALLV LGWFLRVVES EVAGSARSRV 
RYLDA