| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1392 |
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| Symbol | |
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| ID | 3903373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1672787 |
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| End bp | 1674274 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878729 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_480498 |
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| Protein GI | 86740098 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.243697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000446309 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCGTG TTGTGGTGAT CGGCGCCGGT GTGGGCGGGC TGGCGGCCGC GGCCCGGCTC
GCCGCCACCG GGCATGACGT GACGGTCTGC GAGCAGTCGT CGCGGACCGG AGGCAAGCTC
GGCTGGTACG AGCGCGATGG GTTCGGCTTC GACACCGGTC CGTCCCTGCT GACCATGCCC
GGCGTGTTCG AGGACCTGTT CACCGCGACC GGCGGGCCGT TGCGCGGCGA GGTGGAGCTG
CGTCGGCTGG ACCCGATCGC GTCCTACCGG TTCGCCGACG GCACGACGCT CGCCGCACAT
GCCGACGACG ACGCGTTCGT GGCCGAACTG GACGATCGGA TCGCCCCCGG GTCGGGCGAG
GACTGGCGGC GGCTCGCCGA CCGGGCCTGC CGGGTCTTCG ACGCCGCCGA AGGACCGTTC
CTGTCCAGTC CCGTGTCGGC GACCGGGCTG GTTCGGCTCG CCTGGTCCGC ACCCGGTGAC
ATCGCCGCGA TCGCGCCCGG CCGGAGCCTG CGCCGGCTGG GCCTGCGCTA CCTGCGTGAT
CCCCGGCTGC GGATGATCCT GGACCGCTAT GCCACCTACT CCGGGTCCGA TCCCCGGCAC
GCCCCCGCCG CTCTGGTGTC GGTGGTCCAC GCGGAACGGC GCTTCGGGGG CTGGTACGTC
GCGGGCGGCC TGCGCCGCCT CGGGGATGCG CTCACCCGCC GCGCCGAGGA ACGCGGCGTC
CGGATCCTGC TCGACGCGCC GGTGCTGGCG GTGACCCGGA CCCCCGGCGG CCGGGTCGAC
GGGGTCCGTC TCGCCGACGG TATCCGGCTG CCCGCGGACG TCGTCGTCGC GAACGCCGAC
GCGGCGGCGC TCTACGGCCG GCTGGTGAAC GATCGGGTCG GCCGCCGGCG GCTGCGGCGG
ACTGTACCGT CGATGTCCGG CTTCGTGCTG CTGCTGGCCC TGACGGGTCG CACGCCCGGG
CTGGGGCATC ACACGGTCAC CTTCCCCGCC GACTACGATG CCGAGTTCGA TGCCGTCTTC
GCGGGCCGGC TGGCGGCCGA TCCCACTATC TATCTTGCCG CGCCCGCCGA CCCGGCCTGC
GCGCCGCCGG GCTGCGAGGC GTGGTTCATC CTGGTGAACG CGCCCCCGCA TCGCGGCGCG
GGCGGCCACA ACGGCGCAGG CACCCTGGAC TGGGACCGTC CCGGGCTCAC CGACGGCTAC
GCCCGGCGCA TCCTCGACGT GCTCGCCGCC CGCGGGTTCG ACGTCCGCTC CCGGTTGCGC
TGGTACGAGA CCATCACCCC GGCGGATCTG GAACGGCGCA CCGGGACGGT GGGCGGATCC
ATCTACGGTG GATCCTCGAA CGGCGTGCGG GCGGCCTTCC TGCGGCCTCC GAACGCATCC
CGGGTACCCG GCCTGTTCCT CGTCGGTGGG TCAACCCATC CCGGCGGCGG GCTGCCGCTC
GTCGTGCTCT CCGCCGGCAT CGTCGCCGGT CTCATCGGCC CGGCCTGA
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| Protein sequence | MARVVVIGAG VGGLAAAARL AATGHDVTVC EQSSRTGGKL GWYERDGFGF DTGPSLLTMP
GVFEDLFTAT GGPLRGEVEL RRLDPIASYR FADGTTLAAH ADDDAFVAEL DDRIAPGSGE
DWRRLADRAC RVFDAAEGPF LSSPVSATGL VRLAWSAPGD IAAIAPGRSL RRLGLRYLRD
PRLRMILDRY ATYSGSDPRH APAALVSVVH AERRFGGWYV AGGLRRLGDA LTRRAEERGV
RILLDAPVLA VTRTPGGRVD GVRLADGIRL PADVVVANAD AAALYGRLVN DRVGRRRLRR
TVPSMSGFVL LLALTGRTPG LGHHTVTFPA DYDAEFDAVF AGRLAADPTI YLAAPADPAC
APPGCEAWFI LVNAPPHRGA GGHNGAGTLD WDRPGLTDGY ARRILDVLAA RGFDVRSRLR
WYETITPADL ERRTGTVGGS IYGGSSNGVR AAFLRPPNAS RVPGLFLVGG STHPGGGLPL
VVLSAGIVAG LIGPA
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