| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1381 |
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| Symbol | |
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| ID | 3906583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1660019 |
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| End bp | 1660897 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878718 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_480487 |
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| Protein GI | 86740087 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0156002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAGTT CAAAGGAGCG ACGTCAACGC GAGCTCGCCG AGGCCCGGGC GGCCCGGCAG
GCGCAGCGGC GCCGGCTCGC CCATCGCCGT CGTCAGCAGC GGCTCGCGAT CGTCGCCGGA
TTCATCGCGA TCGTCGTCGC GGCATCGACG ATCGCCGCGA TCCTGCTCAC CGGCAAGGAC
GACCAGCCCG ACGTGGCCGC CGCCGGTGCC GCGACGACAC CCACCGCGAC CGCACCCACC
GCGACCGCAC CGACACCATC GGCCGCCCCC CGTCAGACCA GCAGGGTCGG GCAGTGCACC
TACACCTCCA ACGGGGAGGC CCCGGCCCGC GGCGCCACCC TGCCGGCGGC CGCGGCCACC
GTCGACACGT CCCCGGCGAC AATGGTGATC ATCACCGACG CCGGCACCAT CACGGCCGCC
TTGGACGCCC AGAAGGCACC ATGCACGGTG CACGCCCTGC GCACGCTCGC CGACGCCAGG
TACTTCGACG GCACCACGTG CCACCGCCAG ACCGGGGGGG CCGACGCAGG CATCTCGGTC
CTGCAGTGCG GCGATCCCAC CGGAACCGGC AACGGCGGCC CGGGGTACGG GTACGCCAAC
GAGAATACCC AGGGCGTGAC CTACGACCGA GGCGTGCTGG CGATGGCGCA CAGCCAACTG
CCGGACAGCA ACGGCAGTCA GTTCTTCATC AACTACCAGA ACCCGACCCC GCAGGGCGCG
GCGGCGCTCG CCGGCAATTA CACCGTCTTC GGGAAGATCA CCAAGGGACT CGACGTGCTC
GACAAGCTCA CCGGGCCCGG CGTCGAGGGC GGCGGCTCCG ATGGTGCCCC GGCGAGCAAG
CCGAAGATTC TTTCGATCAC GATCACCCAG GGCGGCTGA
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| Protein sequence | MASSKERRQR ELAEARAARQ AQRRRLAHRR RQQRLAIVAG FIAIVVAAST IAAILLTGKD
DQPDVAAAGA ATTPTATAPT ATAPTPSAAP RQTSRVGQCT YTSNGEAPAR GATLPAAAAT
VDTSPATMVI ITDAGTITAA LDAQKAPCTV HALRTLADAR YFDGTTCHRQ TGGADAGISV
LQCGDPTGTG NGGPGYGYAN ENTQGVTYDR GVLAMAHSQL PDSNGSQFFI NYQNPTPQGA
AALAGNYTVF GKITKGLDVL DKLTGPGVEG GGSDGAPASK PKILSITITQ GG
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