| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1380 |
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| Symbol | |
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| ID | 3906582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1658205 |
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| End bp | 1660010 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637878717 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_480486 |
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| Protein GI | 86740086 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.942893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0185831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAGCCG GCCCCCTCGA CCGAAGCCCT CGTCCACGAC GTCCCGTTCC ACCAGCCCGA
CCGCTGCGCG CGTGGCAGCG TGCGGCCCTG GAGATCTACC GGTCACGGTC GTCGTCGGGC
GCCCGGGACT TCATGGCGGT CGCCACCCCG GGCGCCGGGA AGACGACCTT CGCCCTGCAG
GTGGCCGCCG ACCTTCTCAC TGCCGGCGAG ATCAGTCGGA TCACCGTCGT CGCGCCCACC
GAGCACCTCA AACGCCAGTG GGCCGTGGCC GCGGCGGAGG TTGGTGTCGA CCTCGATCCG
GACTTCCGCA ACTCGGCCGG GGCGACATCC TCCGACTACA CCGGTGTCGC CGTGACCTAC
GCCCAGGTGG CGGCGCATCC GGCCCTGCAC CGTGCCCGGA CCGCCGCGCG TCGCACCCTG
ATCGTCCTGG ACGAGATCCA CCACGCCGGC GACGCGCTGT CATGGGGTGA GGCGATCCGG
GAGGCGTTCA CCCCGGCCGC GCGTCGCCTC GCCCTGACTG GTACTCCGTT TCGCTCCGAC
GTCAACCCGA TCCCTTTCGT CACCTACCTG CCGGGCCCCG ACGGGGTGAT GCGCAGCATC
GCGGACTCCT CCTACGGCTA TGCCGAGGCG CTGCGCGACG GGGTTGTCCG CCCGGTGCTC
TTCCTCGCCT ACTCGGGCGA GATGACCTGG CGGACCAGTG CCGGCGCGGA ACTGAGCGCC
CGACTCGGGG AGCCGCTCAC CAACGAGCAG ACCGCCGCCG CGTGGCGCAC CGCGCTCGAC
CCGGGCGGGG ACTGGATGCC GGCGGTGCTC GCCTCCGCCG ACACCCGGCT GTCCCAGGTG
CGGGCCGGCG GCATGCCCGA CGCGGGCGGG CTGGTCATCG CCACGGATCA CGCGGCCGCG
CGCGCCTACG CCGCGCTGCT CACCCGGATC ACCGGCACCT CGCCCGTGCT GATCCTCTCC
GACGACCCGA CCGCGTCGAC CAAGATCGAT GACTTTCGCC GGTCGGCCGA CCGGTGGATG
GTGGCGGTAC GGATGGTCAG TGAGGGCGTG GACGTGCCTC GCCTGGCGGT CGGGGTCTAT
GCGACCTCGG CGTCAACCCC GCTGTTCTTC GCCCAGGCCG TCGGGCGGTT CGTTCGGGGC
CGCGGTCGCG GGGAGACGGC GTCGGTCTTC CTCCCGAGCG TGCCGTCCCT GCTGGCGCTG
GCTGGCGAGA TGGAGGTCCA GCGGGACCAC GCCCTGGAGA AGTCCCCGCG CGATCCGGAC
GCCTTCGACG ACGACGCGCT GCGGGACGCC AACCGGCGCA AGGACATCCC CGACAAGCCG
GACACCTTGT TCACGGCGTT GGGATCCTCG GCCCATCTCG ACCGAGTGAT CTTCGATGGC
GGCGAGTTCG GCACCCCGGC GGCCCCCGGG TCCATCGAGG AGGAGGACTT CCTGGGCCTG
CCGGGCCTGC TGGAGCCCGA TCAGGTCGCG GTTCTGCTGC GCCAGCGGGA GGCCGCCCAG
CAGGCCGCCC AGCAGGCCGC CACGCGCCGT GCCGCTGCCC GTGCCGCGGA TTCGCCGGTC
GTCCCGCCGG CCCGCGAGGG CGTGCAGCCG GCGGTCGAGG CGGCCACCCG GCCCGTGCAC
GAGGTGATCG GCGAGCTGCG CAAGGAGCTG AACCGGCTTG TCGGCGCACA CTTCCACCGC
ACGGGCAAAC CGCACGGGAT GATCCACGCC GAGCTGCGCC GGACCTGTGG CGGTCCGCCG
AGCGGCCAGG CCACCGCCGC GCAGCTCCAG GCCCGCATCG ACACCATCCG CCGCTGGGCC
GGTTGA
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| Protein sequence | MRAGPLDRSP RPRRPVPPAR PLRAWQRAAL EIYRSRSSSG ARDFMAVATP GAGKTTFALQ
VAADLLTAGE ISRITVVAPT EHLKRQWAVA AAEVGVDLDP DFRNSAGATS SDYTGVAVTY
AQVAAHPALH RARTAARRTL IVLDEIHHAG DALSWGEAIR EAFTPAARRL ALTGTPFRSD
VNPIPFVTYL PGPDGVMRSI ADSSYGYAEA LRDGVVRPVL FLAYSGEMTW RTSAGAELSA
RLGEPLTNEQ TAAAWRTALD PGGDWMPAVL ASADTRLSQV RAGGMPDAGG LVIATDHAAA
RAYAALLTRI TGTSPVLILS DDPTASTKID DFRRSADRWM VAVRMVSEGV DVPRLAVGVY
ATSASTPLFF AQAVGRFVRG RGRGETASVF LPSVPSLLAL AGEMEVQRDH ALEKSPRDPD
AFDDDALRDA NRRKDIPDKP DTLFTALGSS AHLDRVIFDG GEFGTPAAPG SIEEEDFLGL
PGLLEPDQVA VLLRQREAAQ QAAQQAATRR AAARAADSPV VPPAREGVQP AVEAATRPVH
EVIGELRKEL NRLVGAHFHR TGKPHGMIHA ELRRTCGGPP SGQATAAQLQ ARIDTIRRWA
G
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