Gene Francci3_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1378 
Symbol 
ID3906580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1656190 
End bp1656516 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content61% 
IMG OID637878715 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_480484 
Protein GI86740084 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.897354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0284083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTCACC TTCAGGTCAT CGTGAGTATC GACTCCCGGG AAAGCGCTGA CCGTATCGGT 
AGGATCCTGG TGGAGGCGCG TCTGGTCGCC TGTTTCCAGG TGATCGGACC GATGAGCAGC
ACCTACCGCT GGAAGGGCCA GATCGAGCAG GCCGAGGAAT GGCTCTGTCT GGCGAAAACG
ACCACCGAAC GATTCGATGA GCTACATGAG CGGCTCGTGG TCCTCCACCC CTACGAAAAT
CCCGAGATCA TTGCCACGCC GATCGTCGCC GGCCATGCCG ACTATCTGGG CTGGATCAGC
GCCGAGACGG CACCCACCGT CAGGTGA
 
Protein sequence
MGHLQVIVSI DSRESADRIG RILVEARLVA CFQVIGPMSS TYRWKGQIEQ AEEWLCLAKT 
TTERFDELHE RLVVLHPYEN PEIIATPIVA GHADYLGWIS AETAPTVR