| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1377 |
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| Symbol | |
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| ID | 3906579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1653600 |
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| End bp | 1655843 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878714 |
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| Product | (p)ppGpp synthetase I |
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| Protein accession | YP_480483 |
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| Protein GI | 86740083 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0428381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGCTG AGACCGTGGG TGCGGGTCTG CCGGCCGGCG GCGGTCTGAC CCCCGCGCTG
TCCCGGGCCG ACGGCGGTGC CGACGAGGCC TCCCGGGCCC TGTCGGCGGC CCGGCAGGCG
AGCGTGCGTC TCGCCCACCT GGCCCGGCGG ATGGCGACAC CGCGGATGTC CCAGGTGCCG
CCGGAGCTGC GTGACATCGT CGAGGCGCAT CGCGACTATC ATCCGCGCGC CGACATCGGC
CTGCTGGTGC ACGCCTACGG CGTCGCCGAG CGGCTGCACG CCGGTCAGAT GCGGCGCAGC
GGGGATCCGT ACATCAGCCA TCCCCTCGCC GTCACCGAGG TCCTCGCGGA GCTGGGGGTG
GACACGACTA CCCTGATCGC TGCCCTGCTG CATGACACGG TCGAGGACAC CGGGTACACC
CTCGACTCCG TCACCCAGGA GTTCGGCGCG GAGGTGGCCA ACCTCGTCGA CGGTGTCACC
AAGCTGGACA AGATGCGGTT CGGGGAGGCC GCGGAGGCCG AGACGCTGCG CAAGCTGATC
GTGGCCTTGG CCCGGGACTA CCGAGTACTG GTCATCAAGA TCGCGGACCG GTTGCACAAC
ATGCGCACGC TCGCCTTCAT GTCCCCTCCC AAACAGGTGA AGATCTCCCG GGTCACGCTC
GAGGTCCTGG CCCCGCTGGC CCACCGGCTC GGCGTCAGTG TGATCAAGCG AGAGCTGGAG
GACCGGGCGT TCGCCGTGCT CCATCCCGCC GAGCACGCCC GGATTGCCGC CACGGTGGAC
GAGTTCACCG CCGCTGAGCG CGCGGCCGGA ACCGTCGCGG CGCTGGTGGC ACGGTTGCGA
GCCGGGCTCG CGGGGGCTCG CATCGACGGC GCCGTCTCCA TCCGGGTCAG CCACCTGTTC
TCGATCTACA AGCGGGCTCA GGAGCGCAAC CGGCCCGTCC AGGACTACAC CGACCTCGTC
CGCGTCCTCG TGCTCGTTGA CGAGGTGACG GACTGTTACG CGGCGCTGGG TGTCATCCAC
GCCCTGTGGC GACCGGTGCC CGGCAGGCTG CGCGACTTCG TGGCTACCCC GAAGTTCAAC
ATGTACCAGT CCCTGCACAC GACGGTGACC GACGGCGCCG GCCGCTCCCT CGACATCCAG
ATCAGGACGC CGTCGATGCA CCGGCTGGCC GAGACCGGGA TCGTCGCCCG ACCGGTCGGC
CCCGGCGCGG ACGGCGCCCG CCTGGAGGGC CTGTCCTGGT TGCACAGCTT GCTGGACTGG
CAGGAGGAGG TCGACTCGGA CGAGTTCCTC GAGTCGCTGT CCTCAGACCT GGATGCCGAC
GAGGTGCTGG CGTTCACGCC CAAGGGCAGG ATGCTCGCAC TGCCGGCCCG GTCCTCCCCG
GTGGACGTCG CCTACGCCGT GCACACCGAC ATCGGGCACC GGGCGATCGG CGCCCGGGTC
AACGGTCGGC TCGTCCCGTT GCATACCCGG CTGCGCAACG GCGACGTCGT CGAGATCCTG
ACCTCCAACC TCCCCGGCGC GGGACCGTCG GAGGACTGGT TGCACTTCGT CAGGACCTCC
CGGGCCCGGG TACGTATCCG GCGCCGGCTG GCCCGGCAGC GCAGGGACAC CGCCGCCGGG
GCGGCCGAGC CGGGCGTCAC GACCACCCGG TCCGGGAGCG GCGGCGGGGC GCGGACCGCC
GGCGGCGCGG ACGGCGCCTC GTCGGGCCTG CCGTCGCCGA CCCGTCCGAT CGCCCGGCGT
GGGATGCCCA GCCTCGCGGC CGTGGCAGAC GACGGGGTGG GTGGTCGGGT GCCGGCGAGG
CTGGCGCGAT GTTGCCTTCC GCTGCCCGGA GACGTGGTCG TCGGCTTCGC GACGCACGGC
AGCACCGTGT CTCTGCACCG CCGGGAGTGC ATGAACGCCA CCGAGGCGGG GTCGGACCGC
GAGCGCGTCG CGGTGGCGAC CTGGTCGGCA CCACAGGCGC AGATTTTTCC CGCGGAGATC
GCCGTCGAGG CGTTCGACCG CTACGGGCTG CTCGCGGACA TCACCGAGGT GCTCTCGGAG
ATCTCGGCGT CCGTCCGCGC GGCCTCGACG ACCACATCCG ATGATCGGGT CGCGCATGCG
CGTTTCACGA TCGAGGTCAC CGGGCCGGAG CAACTGGACA AGGTGCTCGG CGCCGTGCGC
GGCGTCGGCG GTGTCTACGA CTGCTACCGC GTGTGCCAGA CCCAGGGGTC GTCGGCTCAC
GGCGCGCCCG CCGGGGACGG GTGA
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| Protein sequence | MDAETVGAGL PAGGGLTPAL SRADGGADEA SRALSAARQA SVRLAHLARR MATPRMSQVP
PELRDIVEAH RDYHPRADIG LLVHAYGVAE RLHAGQMRRS GDPYISHPLA VTEVLAELGV
DTTTLIAALL HDTVEDTGYT LDSVTQEFGA EVANLVDGVT KLDKMRFGEA AEAETLRKLI
VALARDYRVL VIKIADRLHN MRTLAFMSPP KQVKISRVTL EVLAPLAHRL GVSVIKRELE
DRAFAVLHPA EHARIAATVD EFTAAERAAG TVAALVARLR AGLAGARIDG AVSIRVSHLF
SIYKRAQERN RPVQDYTDLV RVLVLVDEVT DCYAALGVIH ALWRPVPGRL RDFVATPKFN
MYQSLHTTVT DGAGRSLDIQ IRTPSMHRLA ETGIVARPVG PGADGARLEG LSWLHSLLDW
QEEVDSDEFL ESLSSDLDAD EVLAFTPKGR MLALPARSSP VDVAYAVHTD IGHRAIGARV
NGRLVPLHTR LRNGDVVEIL TSNLPGAGPS EDWLHFVRTS RARVRIRRRL ARQRRDTAAG
AAEPGVTTTR SGSGGGARTA GGADGASSGL PSPTRPIARR GMPSLAAVAD DGVGGRVPAR
LARCCLPLPG DVVVGFATHG STVSLHRREC MNATEAGSDR ERVAVATWSA PQAQIFPAEI
AVEAFDRYGL LADITEVLSE ISASVRAAST TTSDDRVAHA RFTIEVTGPE QLDKVLGAVR
GVGGVYDCYR VCQTQGSSAH GAPAGDG
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