Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1376 |
Symbol | |
ID | 3906578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1650989 |
End bp | 1653577 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637878713 |
Product | (p)ppGpp synthetase I |
Protein accession | YP_480482 |
Protein GI | 86740082 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.640463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0959859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGAGG CAGCGCCGGT GACCACCGGA GTTTCGCAGC CCGCCGTCAC TCCCTTCCGG GAGCCCCGGC CGGTGGGCGA TGCCGCGCGG GCCACCGCCG GATCGGCGGC GCGTGAGTCG GCAGTCCACG GGCCGGCAGT CCACGGGCCG GCACAGCCGC CGGCTGCGGA TGGTGGCGAC GTCCGCGGGC AGGAGCCGCC GGGTGGATCC CCGGGGGGGT CCGAGCTGGT CACCGCGGTC GGCATGGGAC GGCGTCCCGA GGACGGTTCC CCGGTCGTCC CCCGGTTGGG GCACGAGTCG CCGCCGCTGC CGCGTCGGGT ACGCGGTCGG CTCTCCCGCC TTGCGACGCA CCGGGCGACG CCTCCCTCGG CTCTCGACCC GGTGCTGCGT GGGCTGCTCG CGAACCACCC GCGCGCCGAC ATCGCCCAGG TGCAGCAGGC GTTCGAGGTC GCCGACGCCG CGCACGCCGG CCAGGTGCGC TTCTCCGGCC ACCCGTACAT CACTCATCCG ATCGCGGTCG CGAGCATCCT CGCCGATCTG GGGATGGACA CCGCGACGCT GTCCGCGGCG TTGCTGCACG ACACCCTCGA GGAGACGACG CTTACCGTCG ATGCAATCCG GGACACCTTC GGTGACCATA TCGCGCTCAT CGTCGACGCG GTCAGCAAGC TCAACCGGGT CAAGGTCGGC GAGGCGGCCC AGGCGGAGAC CATCCGCCGG ATGGTCGTCG CGATGGCCCG CGACCCACGC GCGCTGGTGG TCAAGCTCGC CGACCGCCTG CACAACATGC GTACCCTGCG CTTTCTGCCC GAGCACAAGC AGGAACGCAA GGCTCGGGAG ACGCTCGAGG TCTACGCCCC GCTCGCCCAC CGGCTCGGCA TGAACTCGTT GAAGTGGGAG CTGGAGGACC TCTCGTTCGC CGCGTTGTAT CCGAAACGGT ACGACGAGAT CGTCCGGCTG GTCGCTGACC GGGCCCCGAG CCGGGACGTC TATCTGGCCG AGGTGATCGG GCAGGTACAG GTCGGCCTGC GGGACGCGCG GATCAAGGCG GTCGTCTCCG GGCGGCCGAA GCACTATTAC TCGATCTACC AGAAGATGGT GGTGCGCGGC CGTTCCTTCG ACGACATCTA TGATCTGGTC GGCATCCGCG TCCTGGTCGA CTCGGTCCGG GACTGCTATG CCACGCTGGG TACCGTGCAC GCGACCTGGA AGCCGATTCC CGGCCGGTTC AAGGACTACA TCGCGATGCC CAAGTTCAAC ATGTACCAGT CCTTGCACAC GACGGTCATC GGTCCCGAGG GCAAACCGGT CGAGCTGCAG ATCCGCACGC ACGCGATGCA CAACCGGGCC GAGTACGGCA TTGCCGCGCA CTGGAAGTAC AAGGAGGACG GGGTTGCGGC CCGGCCCTCG GCGGGGACCC CGGAGGGCGG GCGGGCCGGT CGGCGCAAGG GCGGACCCGA TGCGGACCTC ATGACCTGGC TGCGTCAGGT GCTCGACTGG CAGCGGGAGA CCGCGGACCC GGGAGAGTTC CTCGACAGCC TGCGGTTCGC CGCCGAGACC GACGAGGTTT TCGTCTTCAC CCCCAAGGGC GACGTCATCC CGCTGCCTGC CGGGTCGACC TCGGTGGACT TCGCTTACGC GGTGCACACC GACATCGGCC ACCAGTGCGT CGGGGCCCGG ATCAACGGCC GTCTCGCGGC CCTGGACACC CCGCTGGACA ACGGCGACGC GGTCGAGATC TTCACCTCGC GGGCCCATTC GGCCGGCCCG AGCGAGGACT GGTTGATGTT CGTCCGTTCG TCGCGGGCCA GGACGAAGAT CCGCCAGTGG CACGCCCGTG GGCGCCGGGA GGACGCGATC GTCGCCGGCC GCGACGCGAT CGGCCGCGCG ATGCGCCGCC ACGGCCTGCC GCTGTCCCGC CTGATGAGCG GGGACGCGCT GTTGAACCTG GCCAAGGACC TGCGCTACGC CGACGTGGCC GCCCTCTACG CGGCCGTGGG GGAGAACCAC GTCAGCGCCC AGTCGGTGGT CTCGCGGCTG CTCGTGGCCC TCGGCGGTCC GGAGGGGGCC GAGGAGGACG CGGGTGAGAC CGAGCTGCCG ATCCGCACGC TGCGTCGCTC GACCGGGGAG GCGGGGGTGC TCGTCACCGG TGCTCCCGAC GTGTGGACGA AGCTCGCCCG CTGCTGCACC CCCATGCCCG GCGACGAGAT CGCCGGTTTC GTCACCCGGG GCAAGGGCGT GTCGGTCCAC CGGACGGACT GCTCCAACCT GTCGGGGCTG CGCGGCGGGC CGCACGACCG CACGGTCCAG GTCGAGTGGG CGCCGTCGTC GGGCTCGGTG TTCCTCGTCG TGATCCAGGT CGAGGCGATG GACCGTACCA AACTACTTTC GGATGTCACC CGGGTACTGT CCGACCGGCA CGTGAACATC CTGTCGGCGT CGGTGGCCAC CACACGGGAT CAGGTGGCGG TCAGCCGCTT CACGTTCGAG ATGGGAGACG CCAAGCATCT CCGGCACATC CTGAGTGCGG TGCGTGCCAT CGAGGGCGTA TACGGCTGTT TCCGCGTTAC CTCGGGCGTA CAGGTCTAA
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Protein sequence | MPEAAPVTTG VSQPAVTPFR EPRPVGDAAR ATAGSAARES AVHGPAVHGP AQPPAADGGD VRGQEPPGGS PGGSELVTAV GMGRRPEDGS PVVPRLGHES PPLPRRVRGR LSRLATHRAT PPSALDPVLR GLLANHPRAD IAQVQQAFEV ADAAHAGQVR FSGHPYITHP IAVASILADL GMDTATLSAA LLHDTLEETT LTVDAIRDTF GDHIALIVDA VSKLNRVKVG EAAQAETIRR MVVAMARDPR ALVVKLADRL HNMRTLRFLP EHKQERKARE TLEVYAPLAH RLGMNSLKWE LEDLSFAALY PKRYDEIVRL VADRAPSRDV YLAEVIGQVQ VGLRDARIKA VVSGRPKHYY SIYQKMVVRG RSFDDIYDLV GIRVLVDSVR DCYATLGTVH ATWKPIPGRF KDYIAMPKFN MYQSLHTTVI GPEGKPVELQ IRTHAMHNRA EYGIAAHWKY KEDGVAARPS AGTPEGGRAG RRKGGPDADL MTWLRQVLDW QRETADPGEF LDSLRFAAET DEVFVFTPKG DVIPLPAGST SVDFAYAVHT DIGHQCVGAR INGRLAALDT PLDNGDAVEI FTSRAHSAGP SEDWLMFVRS SRARTKIRQW HARGRREDAI VAGRDAIGRA MRRHGLPLSR LMSGDALLNL AKDLRYADVA ALYAAVGENH VSAQSVVSRL LVALGGPEGA EEDAGETELP IRTLRRSTGE AGVLVTGAPD VWTKLARCCT PMPGDEIAGF VTRGKGVSVH RTDCSNLSGL RGGPHDRTVQ VEWAPSSGSV FLVVIQVEAM DRTKLLSDVT RVLSDRHVNI LSASVATTRD QVAVSRFTFE MGDAKHLRHI LSAVRAIEGV YGCFRVTSGV QV
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